Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 CD320-202ENST00000537716 1119 ntTSL 2 BASIC22.68■■□□□ 1.22
RFX7Q2KHR2 AC116407.4-201ENST00000623319 1061 ntBASIC22.68■■□□□ 1.22
RFX7Q2KHR2 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC22.68■■□□□ 1.22
RFX7Q2KHR2 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC22.68■■□□□ 1.22
RFX7Q2KHR2 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC22.68■■□□□ 1.22
RFX7Q2KHR2 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RFX7Q2KHR2 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
RFX7Q2KHR2 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC22.68■■□□□ 1.22
RFX7Q2KHR2 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RFX7Q2KHR2 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
RFX7Q2KHR2 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC22.68■■□□□ 1.22
RFX7Q2KHR2 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC22.68■■□□□ 1.22
RFX7Q2KHR2 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC22.68■■□□□ 1.22
RFX7Q2KHR2 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RFX7Q2KHR2 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
RFX7Q2KHR2 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RFX7Q2KHR2 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC22.67■■□□□ 1.22
RFX7Q2KHR2 ANO7L1-203ENST00000602586 1720 ntBASIC22.67■■□□□ 1.22
RFX7Q2KHR2 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
RFX7Q2KHR2 PCED1CP-201ENST00000419887 785 ntBASIC22.67■■□□□ 1.22
RFX7Q2KHR2 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC22.67■■□□□ 1.22
RFX7Q2KHR2 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
RFX7Q2KHR2 GCSHP2-201ENST00000560971 527 ntBASIC22.67■■□□□ 1.22
RFX7Q2KHR2 METTL23-204ENST00000586752 904 ntTSL 2 BASIC22.67■■□□□ 1.22
RFX7Q2KHR2 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
RFX7Q2KHR2 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RFX7Q2KHR2 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
RFX7Q2KHR2 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
RFX7Q2KHR2 AL138781.2-201ENST00000617896 1843 ntBASIC22.67■■□□□ 1.22
RFX7Q2KHR2 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
RFX7Q2KHR2 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RFX7Q2KHR2 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC22.67■■□□□ 1.22
RFX7Q2KHR2 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RFX7Q2KHR2 SNAI3-AS1-205ENST00000568633 2096 ntBASIC22.67■■□□□ 1.22
RFX7Q2KHR2 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
RFX7Q2KHR2 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC22.66■■□□□ 1.22
RFX7Q2KHR2 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
RFX7Q2KHR2 COBL-210ENST00000632460 1941 ntTSL 5 BASIC22.66■■□□□ 1.22
RFX7Q2KHR2 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC22.66■■□□□ 1.22
RFX7Q2KHR2 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC22.66■■□□□ 1.22
RFX7Q2KHR2 STARP1-201ENST00000397973 869 ntBASIC22.66■■□□□ 1.22
RFX7Q2KHR2 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RFX7Q2KHR2 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC22.66■■□□□ 1.22
RFX7Q2KHR2 KRT18P41-201ENST00000518924 1277 ntBASIC22.66■■□□□ 1.22
RFX7Q2KHR2 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC22.66■■□□□ 1.22
RFX7Q2KHR2 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC22.66■■□□□ 1.22
RFX7Q2KHR2 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC22.66■■□□□ 1.22
RFX7Q2KHR2 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC22.66■■□□□ 1.22
RFX7Q2KHR2 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
RFX7Q2KHR2 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC22.66■■□□□ 1.22
RFX7Q2KHR2 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC22.66■■□□□ 1.22
RFX7Q2KHR2 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC22.66■■□□□ 1.22
RFX7Q2KHR2 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RFX7Q2KHR2 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC22.65■■□□□ 1.22
RFX7Q2KHR2 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC22.65■■□□□ 1.22
RFX7Q2KHR2 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC22.65■■□□□ 1.22
RFX7Q2KHR2 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RFX7Q2KHR2 MIR3180-5-201ENST00000583743 153 ntBASIC22.65■■□□□ 1.22
RFX7Q2KHR2 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RFX7Q2KHR2 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC22.65■■□□□ 1.22
RFX7Q2KHR2 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC22.65■■□□□ 1.22
RFX7Q2KHR2 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RFX7Q2KHR2 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RFX7Q2KHR2 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RFX7Q2KHR2 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RFX7Q2KHR2 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
RFX7Q2KHR2 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
RFX7Q2KHR2 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RFX7Q2KHR2 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RFX7Q2KHR2 IER3-202ENST00000376377 1350 ntBASIC22.65■■□□□ 1.22
RFX7Q2KHR2 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC22.65■■□□□ 1.22
RFX7Q2KHR2 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
RFX7Q2KHR2 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC22.65■■□□□ 1.22
RFX7Q2KHR2 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RFX7Q2KHR2 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RFX7Q2KHR2 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
RFX7Q2KHR2 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
RFX7Q2KHR2 DAP-202ENST00000432074 1048 ntTSL 2 BASIC22.64■■□□□ 1.22
RFX7Q2KHR2 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
RFX7Q2KHR2 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.22
RFX7Q2KHR2 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC22.64■■□□□ 1.22
RFX7Q2KHR2 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
RFX7Q2KHR2 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RFX7Q2KHR2 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.64■■□□□ 1.21
RFX7Q2KHR2 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC22.64■■□□□ 1.21
RFX7Q2KHR2 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
RFX7Q2KHR2 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC22.64■■□□□ 1.21
RFX7Q2KHR2 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RFX7Q2KHR2 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC22.63■■□□□ 1.21
RFX7Q2KHR2 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
RFX7Q2KHR2 AC112907.2-201ENST00000448639 330 ntBASIC22.63■■□□□ 1.21
RFX7Q2KHR2 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RFX7Q2KHR2 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RFX7Q2KHR2 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC22.63■■□□□ 1.21
RFX7Q2KHR2 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC22.63■■□□□ 1.21
RFX7Q2KHR2 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
RFX7Q2KHR2 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RFX7Q2KHR2 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC22.63■■□□□ 1.21
RFX7Q2KHR2 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RFX7Q2KHR2 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms