Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ASIC1P78348 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.94■□□□□ 0.94
ASIC1P78348 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ASIC1P78348 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.94■□□□□ 0.94
ASIC1P78348 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.94■□□□□ 0.94
ASIC1P78348 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.94■□□□□ 0.94
ASIC1P78348 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ASIC1P78348 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
ASIC1P78348 RCC2P3-201ENST00000418112 1537 ntBASIC20.94■□□□□ 0.94
ASIC1P78348 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
ASIC1P78348 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ASIC1P78348 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ASIC1P78348 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ASIC1P78348 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ASIC1P78348 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
ASIC1P78348 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ASIC1P78348 AC009113.1-201ENST00000570267 2443 ntBASIC20.93■□□□□ 0.94
ASIC1P78348 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ASIC1P78348 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
ASIC1P78348 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.93■□□□□ 0.94
ASIC1P78348 AP003071.4-201ENST00000562276 1284 ntBASIC20.93■□□□□ 0.94
ASIC1P78348 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.93■□□□□ 0.94
ASIC1P78348 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.93■□□□□ 0.94
ASIC1P78348 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ASIC1P78348 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.93■□□□□ 0.94
ASIC1P78348 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
ASIC1P78348 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ASIC1P78348 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ASIC1P78348 AC005082.1-201ENST00000413042 2259 ntBASIC20.93■□□□□ 0.94
ASIC1P78348 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ASIC1P78348 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.93■□□□□ 0.94
ASIC1P78348 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ASIC1P78348 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ASIC1P78348 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.92■□□□□ 0.94
ASIC1P78348 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ASIC1P78348 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ASIC1P78348 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ASIC1P78348 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ASIC1P78348 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ASIC1P78348 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ASIC1P78348 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
ASIC1P78348 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ASIC1P78348 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ASIC1P78348 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
ASIC1P78348 HCG11-201ENST00000411553 5696 ntBASIC20.92■□□□□ 0.94
ASIC1P78348 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.92■□□□□ 0.94
ASIC1P78348 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ASIC1P78348 CRYGFP-201ENST00000418459 633 ntBASIC20.92■□□□□ 0.94
ASIC1P78348 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.92■□□□□ 0.94
ASIC1P78348 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ASIC1P78348 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.92■□□□□ 0.94
ASIC1P78348 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ASIC1P78348 NEFHP1-201ENST00000412845 2629 ntBASIC20.92■□□□□ 0.94
ASIC1P78348 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ASIC1P78348 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ASIC1P78348 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ASIC1P78348 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.92■□□□□ 0.94
ASIC1P78348 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.92■□□□□ 0.94
ASIC1P78348 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.92■□□□□ 0.94
ASIC1P78348 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ASIC1P78348 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ASIC1P78348 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.92■□□□□ 0.94
ASIC1P78348 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ASIC1P78348 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ASIC1P78348 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.91■□□□□ 0.94
ASIC1P78348 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ASIC1P78348 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.91■□□□□ 0.94
ASIC1P78348 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ASIC1P78348 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ASIC1P78348 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
ASIC1P78348 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.91■□□□□ 0.94
ASIC1P78348 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
ASIC1P78348 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.91■□□□□ 0.94
ASIC1P78348 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ASIC1P78348 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ASIC1P78348 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ASIC1P78348 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.91■□□□□ 0.94
ASIC1P78348 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
ASIC1P78348 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ASIC1P78348 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.91■□□□□ 0.94
ASIC1P78348 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.91■□□□□ 0.94
ASIC1P78348 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ASIC1P78348 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.91■□□□□ 0.94
ASIC1P78348 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
ASIC1P78348 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.9■□□□□ 0.94
ASIC1P78348 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ASIC1P78348 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.9■□□□□ 0.94
ASIC1P78348 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ASIC1P78348 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ASIC1P78348 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.9■□□□□ 0.94
ASIC1P78348 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ASIC1P78348 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ASIC1P78348 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ASIC1P78348 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ASIC1P78348 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
ASIC1P78348 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.9■□□□□ 0.94
ASIC1P78348 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.9■□□□□ 0.94
ASIC1P78348 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.9■□□□□ 0.94
ASIC1P78348 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
ASIC1P78348 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms