Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SEC61A1P61619 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
SEC61A1P61619 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SEC61A1P61619 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SEC61A1P61619 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SEC61A1P61619 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SEC61A1P61619 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SEC61A1P61619 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SEC61A1P61619 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SEC61A1P61619 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SEC61A1P61619 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SEC61A1P61619 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.41■□□□□ 0.22
SEC61A1P61619 KRT16P5-201ENST00000455284 522 ntBASIC16.41■□□□□ 0.22
SEC61A1P61619 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SEC61A1P61619 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.41■□□□□ 0.22
SEC61A1P61619 RARRES2P10-201ENST00000564312 460 ntBASIC16.41■□□□□ 0.22
SEC61A1P61619 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SEC61A1P61619 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.41■□□□□ 0.22
SEC61A1P61619 AL049637.2-201ENST00000641778 930 ntBASIC16.41■□□□□ 0.22
SEC61A1P61619 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SEC61A1P61619 AC116351.2-201ENST00000606540 1585 ntBASIC16.41■□□□□ 0.22
SEC61A1P61619 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.41■□□□□ 0.22
SEC61A1P61619 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SEC61A1P61619 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SEC61A1P61619 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SEC61A1P61619 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SEC61A1P61619 HTR7P1-201ENST00000538670 1336 ntBASIC16.41■□□□□ 0.22
SEC61A1P61619 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SEC61A1P61619 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SEC61A1P61619 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SEC61A1P61619 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
SEC61A1P61619 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SEC61A1P61619 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SEC61A1P61619 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.41■□□□□ 0.22
SEC61A1P61619 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SEC61A1P61619 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SEC61A1P61619 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SEC61A1P61619 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SEC61A1P61619 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.4■□□□□ 0.22
SEC61A1P61619 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.4■□□□□ 0.22
SEC61A1P61619 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SEC61A1P61619 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SEC61A1P61619 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SEC61A1P61619 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SEC61A1P61619 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SEC61A1P61619 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.4■□□□□ 0.22
SEC61A1P61619 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SEC61A1P61619 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SEC61A1P61619 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SEC61A1P61619 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
SEC61A1P61619 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SEC61A1P61619 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SEC61A1P61619 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
SEC61A1P61619 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SEC61A1P61619 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.4■□□□□ 0.22
SEC61A1P61619 AC113410.3-201ENST00000623366 203 ntBASIC16.4■□□□□ 0.22
SEC61A1P61619 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.4■□□□□ 0.22
SEC61A1P61619 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.4■□□□□ 0.22
SEC61A1P61619 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SEC61A1P61619 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SEC61A1P61619 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SEC61A1P61619 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SEC61A1P61619 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.4■□□□□ 0.22
SEC61A1P61619 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.4■□□□□ 0.22
SEC61A1P61619 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SEC61A1P61619 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SEC61A1P61619 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.4■□□□□ 0.22
SEC61A1P61619 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SEC61A1P61619 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.4■□□□□ 0.22
SEC61A1P61619 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SEC61A1P61619 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SEC61A1P61619 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.4■□□□□ 0.22
SEC61A1P61619 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SEC61A1P61619 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SEC61A1P61619 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SEC61A1P61619 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SEC61A1P61619 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.22
SEC61A1P61619 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
SEC61A1P61619 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SEC61A1P61619 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SEC61A1P61619 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SEC61A1P61619 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SEC61A1P61619 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SEC61A1P61619 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SEC61A1P61619 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SEC61A1P61619 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SEC61A1P61619 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SEC61A1P61619 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
SEC61A1P61619 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SEC61A1P61619 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.39■□□□□ 0.21
SEC61A1P61619 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SEC61A1P61619 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SEC61A1P61619 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SEC61A1P61619 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
SEC61A1P61619 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SEC61A1P61619 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.39■□□□□ 0.21
SEC61A1P61619 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.39■□□□□ 0.21
SEC61A1P61619 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.39■□□□□ 0.21
SEC61A1P61619 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.39■□□□□ 0.21
SEC61A1P61619 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms