Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
ATP1B3P54709 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP1B3P54709 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.29■□□□□ 0.2
ATP1B3P54709 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP1B3P54709 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
ATP1B3P54709 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP1B3P54709 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP1B3P54709 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP1B3P54709 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATP1B3P54709 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ATP1B3P54709 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP1B3P54709 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ATP1B3P54709 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP1B3P54709 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP1B3P54709 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.28■□□□□ 0.2
ATP1B3P54709 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP1B3P54709 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP1B3P54709 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP1B3P54709 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATP1B3P54709 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP1B3P54709 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.28■□□□□ 0.2
ATP1B3P54709 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.28■□□□□ 0.2
ATP1B3P54709 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATP1B3P54709 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.28■□□□□ 0.2
ATP1B3P54709 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP1B3P54709 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.28■□□□□ 0.2
ATP1B3P54709 AL023875.1-201ENST00000640777 796 ntBASIC16.28■□□□□ 0.2
ATP1B3P54709 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP1B3P54709 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP1B3P54709 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.28■□□□□ 0.2
ATP1B3P54709 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP1B3P54709 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
ATP1B3P54709 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.28■□□□□ 0.2
ATP1B3P54709 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP1B3P54709 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.28■□□□□ 0.2
ATP1B3P54709 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
ATP1B3P54709 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
ATP1B3P54709 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATP1B3P54709 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATP1B3P54709 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.27■□□□□ 0.2
ATP1B3P54709 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ATP1B3P54709 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
ATP1B3P54709 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATP1B3P54709 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATP1B3P54709 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
ATP1B3P54709 AC090164.3-201ENST00000610780 2143 ntBASIC16.27■□□□□ 0.2
ATP1B3P54709 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
ATP1B3P54709 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATP1B3P54709 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATP1B3P54709 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATP1B3P54709 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATP1B3P54709 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.27■□□□□ 0.2
ATP1B3P54709 KRT18P6-201ENST00000555540 1265 ntBASIC16.27■□□□□ 0.2
ATP1B3P54709 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.27■□□□□ 0.2
ATP1B3P54709 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.27■□□□□ 0.2
ATP1B3P54709 AC083906.6-201ENST00000641366 219 ntBASIC16.27■□□□□ 0.2
ATP1B3P54709 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ATP1B3P54709 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ATP1B3P54709 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
ATP1B3P54709 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATP1B3P54709 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATP1B3P54709 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATP1B3P54709 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATP1B3P54709 AL512353.2-201ENST00000448759 1962 ntBASIC16.27■□□□□ 0.19
ATP1B3P54709 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ATP1B3P54709 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
ATP1B3P54709 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.27■□□□□ 0.19
ATP1B3P54709 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ATP1B3P54709 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP1B3P54709 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.26■□□□□ 0.19
ATP1B3P54709 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATP1B3P54709 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.26■□□□□ 0.19
ATP1B3P54709 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.26■□□□□ 0.19
ATP1B3P54709 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP1B3P54709 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP1B3P54709 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.26■□□□□ 0.19
ATP1B3P54709 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP1B3P54709 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.26■□□□□ 0.19
ATP1B3P54709 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATP1B3P54709 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
ATP1B3P54709 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP1B3P54709 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.26■□□□□ 0.19
ATP1B3P54709 TSPY23P-201ENST00000440136 739 ntBASIC16.26■□□□□ 0.19
ATP1B3P54709 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.26■□□□□ 0.19
ATP1B3P54709 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
ATP1B3P54709 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.26■□□□□ 0.19
ATP1B3P54709 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.26■□□□□ 0.19
ATP1B3P54709 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
ATP1B3P54709 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATP1B3P54709 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATP1B3P54709 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.26■□□□□ 0.19
ATP1B3P54709 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP1B3P54709 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATP1B3P54709 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATP1B3P54709 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
ATP1B3P54709 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP1B3P54709 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
ATP1B3P54709 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP1B3P54709 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP1B3P54709 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms