Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
POLR2JP52435 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.96■□□□□ 0.47
POLR2JP52435 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
POLR2JP52435 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
POLR2JP52435 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
POLR2JP52435 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
POLR2JP52435 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
POLR2JP52435 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.96■□□□□ 0.46
POLR2JP52435 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.96■□□□□ 0.46
POLR2JP52435 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.95■□□□□ 0.46
POLR2JP52435 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.95■□□□□ 0.46
POLR2JP52435 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
POLR2JP52435 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
POLR2JP52435 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR2JP52435 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
POLR2JP52435 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR2JP52435 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
POLR2JP52435 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.95■□□□□ 0.46
POLR2JP52435 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.95■□□□□ 0.46
POLR2JP52435 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR2JP52435 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR2JP52435 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR2JP52435 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
POLR2JP52435 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
POLR2JP52435 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.95■□□□□ 0.46
POLR2JP52435 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
POLR2JP52435 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
POLR2JP52435 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.95■□□□□ 0.46
POLR2JP52435 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.95■□□□□ 0.46
POLR2JP52435 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.95■□□□□ 0.46
POLR2JP52435 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
POLR2JP52435 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.95■□□□□ 0.46
POLR2JP52435 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR2JP52435 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR2JP52435 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR2JP52435 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR2JP52435 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR2JP52435 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
POLR2JP52435 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR2JP52435 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.95■□□□□ 0.46
POLR2JP52435 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR2JP52435 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR2JP52435 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR2JP52435 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
POLR2JP52435 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
POLR2JP52435 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
POLR2JP52435 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
POLR2JP52435 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
POLR2JP52435 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
POLR2JP52435 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
POLR2JP52435 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
POLR2JP52435 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.94■□□□□ 0.46
POLR2JP52435 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
POLR2JP52435 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.94■□□□□ 0.46
POLR2JP52435 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
POLR2JP52435 AL109923.1-201ENST00000618799 583 ntBASIC17.94■□□□□ 0.46
POLR2JP52435 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
POLR2JP52435 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
POLR2JP52435 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
POLR2JP52435 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
POLR2JP52435 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
POLR2JP52435 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
POLR2JP52435 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
POLR2JP52435 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.94■□□□□ 0.46
POLR2JP52435 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
POLR2JP52435 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
POLR2JP52435 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
POLR2JP52435 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.93■□□□□ 0.46
POLR2JP52435 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
POLR2JP52435 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.93■□□□□ 0.46
POLR2JP52435 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
POLR2JP52435 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
POLR2JP52435 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
POLR2JP52435 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
POLR2JP52435 AC067852.2-201ENST00000590513 2313 ntBASIC17.93■□□□□ 0.46
POLR2JP52435 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
POLR2JP52435 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
POLR2JP52435 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
POLR2JP52435 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
POLR2JP52435 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
POLR2JP52435 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.93■□□□□ 0.46
POLR2JP52435 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.93■□□□□ 0.46
POLR2JP52435 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
POLR2JP52435 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.93■□□□□ 0.46
POLR2JP52435 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.93■□□□□ 0.46
POLR2JP52435 UNC93B5-201ENST00000530315 699 ntBASIC17.93■□□□□ 0.46
POLR2JP52435 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.93■□□□□ 0.46
POLR2JP52435 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
POLR2JP52435 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.93■□□□□ 0.46
POLR2JP52435 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
POLR2JP52435 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
POLR2JP52435 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
POLR2JP52435 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
POLR2JP52435 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.93■□□□□ 0.46
POLR2JP52435 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
POLR2JP52435 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
POLR2JP52435 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.93■□□□□ 0.46
POLR2JP52435 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
POLR2JP52435 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
POLR2JP52435 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms