Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.72■□□□□ 0.91
CDK7P50613 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CDK7P50613 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDK7P50613 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDK7P50613 AC233702.3-201ENST00000578656 1387 ntBASIC20.72■□□□□ 0.91
CDK7P50613 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDK7P50613 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDK7P50613 HOXB1-202ENST00000577092 1414 ntBASIC20.71■□□□□ 0.91
CDK7P50613 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDK7P50613 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDK7P50613 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDK7P50613 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDK7P50613 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDK7P50613 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.71■□□□□ 0.91
CDK7P50613 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDK7P50613 AC010240.3-201ENST00000607688 395 ntBASIC20.71■□□□□ 0.91
CDK7P50613 AL353801.3-201ENST00000609898 542 ntBASIC20.71■□□□□ 0.91
CDK7P50613 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.71■□□□□ 0.91
CDK7P50613 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CDK7P50613 HLA-A-201ENST00000376802 1334 ntBASIC20.71■□□□□ 0.91
CDK7P50613 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDK7P50613 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CDK7P50613 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDK7P50613 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDK7P50613 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.71■□□□□ 0.91
CDK7P50613 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CDK7P50613 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
CDK7P50613 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CDK7P50613 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDK7P50613 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDK7P50613 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDK7P50613 KRT18P23-201ENST00000435622 1283 ntBASIC20.7■□□□□ 0.9
CDK7P50613 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDK7P50613 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.7■□□□□ 0.9
CDK7P50613 AC074051.2-201ENST00000565115 352 ntBASIC20.7■□□□□ 0.9
CDK7P50613 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.7■□□□□ 0.9
CDK7P50613 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.7■□□□□ 0.9
CDK7P50613 AL671883.3-201ENST00000603274 991 ntBASIC20.7■□□□□ 0.9
CDK7P50613 IGHV3-41-201ENST00000613121 348 ntBASIC20.7■□□□□ 0.9
CDK7P50613 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDK7P50613 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDK7P50613 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDK7P50613 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CDK7P50613 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDK7P50613 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
CDK7P50613 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.7■□□□□ 0.9
CDK7P50613 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.7■□□□□ 0.9
CDK7P50613 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.7■□□□□ 0.9
CDK7P50613 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDK7P50613 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDK7P50613 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.69■□□□□ 0.9
CDK7P50613 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDK7P50613 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDK7P50613 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDK7P50613 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDK7P50613 AC099778.1-201ENST00000568593 1911 ntBASIC20.69■□□□□ 0.9
CDK7P50613 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDK7P50613 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDK7P50613 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDK7P50613 IGHV3-47-201ENST00000425060 335 ntBASIC20.69■□□□□ 0.9
CDK7P50613 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDK7P50613 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.69■□□□□ 0.9
CDK7P50613 AP003733.1-201ENST00000491725 852 ntBASIC20.69■□□□□ 0.9
CDK7P50613 AC079776.4-201ENST00000511039 504 ntBASIC20.69■□□□□ 0.9
CDK7P50613 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDK7P50613 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDK7P50613 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDK7P50613 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CDK7P50613 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDK7P50613 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.69■□□□□ 0.9
CDK7P50613 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDK7P50613 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CDK7P50613 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDK7P50613 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.69■□□□□ 0.9
CDK7P50613 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.69■□□□□ 0.9
CDK7P50613 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDK7P50613 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDK7P50613 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDK7P50613 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.68■□□□□ 0.9
CDK7P50613 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDK7P50613 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDK7P50613 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.68■□□□□ 0.9
CDK7P50613 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDK7P50613 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDK7P50613 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
CDK7P50613 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
CDK7P50613 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.68■□□□□ 0.9
CDK7P50613 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDK7P50613 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDK7P50613 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDK7P50613 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDK7P50613 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDK7P50613 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CDK7P50613 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.68■□□□□ 0.9
CDK7P50613 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.68■□□□□ 0.9
CDK7P50613 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.68■□□□□ 0.9
CDK7P50613 AC138894.3-201ENST00000603787 634 ntBASIC20.68■□□□□ 0.9
CDK7P50613 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDK7P50613 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.68■□□□□ 0.9
CDK7P50613 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms