Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CDC34P49427 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC34P49427 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDC34P49427 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDC34P49427 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
CDC34P49427 FST-202ENST00000396947 2538 ntTSL 5 BASIC14.83□□□□□ -0.04
CDC34P49427 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC14.82□□□□□ -0.04
CDC34P49427 AC134043.2-201ENST00000624206 2238 ntBASIC14.82□□□□□ -0.04
CDC34P49427 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC34P49427 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC14.82□□□□□ -0.04
CDC34P49427 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDC34P49427 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC34P49427 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDC34P49427 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC14.82□□□□□ -0.04
CDC34P49427 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDC34P49427 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDC34P49427 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC14.82□□□□□ -0.04
CDC34P49427 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDC34P49427 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC34P49427 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CDC34P49427 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC34P49427 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC34P49427 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDC34P49427 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC14.82□□□□□ -0.04
CDC34P49427 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC14.82□□□□□ -0.04
CDC34P49427 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC14.82□□□□□ -0.04
CDC34P49427 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDC34P49427 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC14.82□□□□□ -0.04
CDC34P49427 KRT18P61-201ENST00000585825 1298 ntBASIC14.82□□□□□ -0.04
CDC34P49427 AC069236.1-201ENST00000604339 616 ntBASIC14.82□□□□□ -0.04
CDC34P49427 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CDC34P49427 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC14.82□□□□□ -0.04
CDC34P49427 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC14.82□□□□□ -0.04
CDC34P49427 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
CDC34P49427 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC34P49427 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC34P49427 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC14.82□□□□□ -0.04
CDC34P49427 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDC34P49427 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC34P49427 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CDC34P49427 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC34P49427 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CDC34P49427 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CDC34P49427 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC34P49427 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC34P49427 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC34P49427 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CDC34P49427 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CDC34P49427 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CDC34P49427 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
CDC34P49427 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDC34P49427 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC14.81□□□□□ -0.04
CDC34P49427 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CDC34P49427 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDC34P49427 GOLGA6L3-201ENST00000507199 1679 ntBASIC14.81□□□□□ -0.04
CDC34P49427 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDC34P49427 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDC34P49427 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDC34P49427 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDC34P49427 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDC34P49427 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDC34P49427 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDC34P49427 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC14.81□□□□□ -0.04
CDC34P49427 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC14.81□□□□□ -0.04
CDC34P49427 RALB-208ENST00000631312 311 ntTSL 5 BASIC14.81□□□□□ -0.04
CDC34P49427 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDC34P49427 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDC34P49427 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC14.81□□□□□ -0.04
CDC34P49427 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDC34P49427 AC068338.2-201ENST00000563278 1430 ntBASIC14.81□□□□□ -0.04
CDC34P49427 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC14.81□□□□□ -0.04
CDC34P49427 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDC34P49427 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDC34P49427 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC14.81□□□□□ -0.04
CDC34P49427 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.81□□□□□ -0.04
CDC34P49427 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDC34P49427 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC34P49427 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.8□□□□□ -0.04
CDC34P49427 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC34P49427 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CDC34P49427 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC34P49427 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC34P49427 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CDC34P49427 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC34P49427 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC34P49427 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC14.8□□□□□ -0.04
CDC34P49427 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC34P49427 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.8□□□□□ -0.04
CDC34P49427 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC34P49427 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC34P49427 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDC34P49427 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC34P49427 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC14.8□□□□□ -0.04
CDC34P49427 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC34P49427 BET1L-204ENST00000410108 637 ntTSL 3 BASIC14.8□□□□□ -0.04
CDC34P49427 KRT18P11-201ENST00000435214 1283 ntBASIC14.8□□□□□ -0.04
CDC34P49427 SERP1-205ENST00000487153 657 ntTSL 4 BASIC14.8□□□□□ -0.04
CDC34P49427 AC008694.1-202ENST00000636953 945 ntBASIC14.8□□□□□ -0.04
CDC34P49427 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CDC34P49427 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms