Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
PCP4P48539 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
PCP4P48539 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC12.96□□□□□ -0.34
PCP4P48539 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
PCP4P48539 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
PCP4P48539 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
PCP4P48539 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
PCP4P48539 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
PCP4P48539 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
PCP4P48539 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
PCP4P48539 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PCP4P48539 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PCP4P48539 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PCP4P48539 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
PCP4P48539 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PCP4P48539 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
PCP4P48539 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
PCP4P48539 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
PCP4P48539 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PCP4P48539 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PCP4P48539 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PCP4P48539 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PCP4P48539 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PCP4P48539 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
PCP4P48539 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PCP4P48539 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PCP4P48539 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PCP4P48539 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
PCP4P48539 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PCP4P48539 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
PCP4P48539 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
PCP4P48539 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
PCP4P48539 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
PCP4P48539 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
PCP4P48539 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
PCP4P48539 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
PCP4P48539 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PCP4P48539 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.94□□□□□ -0.34
PCP4P48539 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PCP4P48539 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PCP4P48539 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PCP4P48539 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
PCP4P48539 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
PCP4P48539 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PCP4P48539 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
PCP4P48539 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
PCP4P48539 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.94□□□□□ -0.34
PCP4P48539 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC12.94□□□□□ -0.34
PCP4P48539 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
PCP4P48539 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.94□□□□□ -0.34
PCP4P48539 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
PCP4P48539 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PCP4P48539 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PCP4P48539 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.94□□□□□ -0.34
PCP4P48539 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
PCP4P48539 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
PCP4P48539 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC12.94□□□□□ -0.34
PCP4P48539 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
PCP4P48539 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PCP4P48539 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PCP4P48539 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PCP4P48539 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PCP4P48539 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC12.94□□□□□ -0.34
PCP4P48539 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PCP4P48539 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
PCP4P48539 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
PCP4P48539 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12.94□□□□□ -0.34
PCP4P48539 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
PCP4P48539 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.93□□□□□ -0.34
PCP4P48539 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
PCP4P48539 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PCP4P48539 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC12.93□□□□□ -0.34
PCP4P48539 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PCP4P48539 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
PCP4P48539 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
PCP4P48539 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PCP4P48539 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC12.93□□□□□ -0.34
PCP4P48539 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PCP4P48539 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
PCP4P48539 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC12.93□□□□□ -0.34
PCP4P48539 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC12.93□□□□□ -0.34
PCP4P48539 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PCP4P48539 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PCP4P48539 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
PCP4P48539 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PCP4P48539 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
PCP4P48539 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PCP4P48539 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
PCP4P48539 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
PCP4P48539 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PCP4P48539 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.93□□□□□ -0.34
PCP4P48539 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
PCP4P48539 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.93□□□□□ -0.34
PCP4P48539 AP002414.2-201ENST00000591780 3365 ntBASIC12.93□□□□□ -0.34
PCP4P48539 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC12.93□□□□□ -0.34
PCP4P48539 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC12.93□□□□□ -0.34
PCP4P48539 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
PCP4P48539 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
PCP4P48539 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
PCP4P48539 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms