Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AL645929.1-201ENST00000420084 975 ntBASIC19.95■□□□□ 0.78
BRCC3P46736 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
BRCC3P46736 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.95■□□□□ 0.78
BRCC3P46736 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.95■□□□□ 0.78
BRCC3P46736 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.95■□□□□ 0.78
BRCC3P46736 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
BRCC3P46736 AC069148.1-201ENST00000608741 768 ntBASIC19.95■□□□□ 0.78
BRCC3P46736 AL161938.1-201ENST00000569833 2180 ntBASIC19.95■□□□□ 0.78
BRCC3P46736 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
BRCC3P46736 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BRCC3P46736 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BRCC3P46736 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BRCC3P46736 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
BRCC3P46736 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.94■□□□□ 0.78
BRCC3P46736 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BRCC3P46736 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BRCC3P46736 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
BRCC3P46736 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
BRCC3P46736 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BRCC3P46736 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.94■□□□□ 0.78
BRCC3P46736 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.94■□□□□ 0.78
BRCC3P46736 KRT18P56-201ENST00000507275 550 ntBASIC19.94■□□□□ 0.78
BRCC3P46736 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.94■□□□□ 0.78
BRCC3P46736 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.94■□□□□ 0.78
BRCC3P46736 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.94■□□□□ 0.78
BRCC3P46736 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.94■□□□□ 0.78
BRCC3P46736 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
BRCC3P46736 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.94■□□□□ 0.78
BRCC3P46736 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.94■□□□□ 0.78
BRCC3P46736 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BRCC3P46736 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.94■□□□□ 0.78
BRCC3P46736 AC006333.2-201ENST00000607957 2099 ntBASIC19.94■□□□□ 0.78
BRCC3P46736 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.94■□□□□ 0.78
BRCC3P46736 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
BRCC3P46736 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
BRCC3P46736 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
BRCC3P46736 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
BRCC3P46736 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.93■□□□□ 0.78
BRCC3P46736 HOXB1-202ENST00000577092 1414 ntBASIC19.93■□□□□ 0.78
BRCC3P46736 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.93■□□□□ 0.78
BRCC3P46736 AC005332.7-201ENST00000614046 2005 ntBASIC19.93■□□□□ 0.78
BRCC3P46736 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BRCC3P46736 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.93■□□□□ 0.78
BRCC3P46736 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BRCC3P46736 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BRCC3P46736 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BRCC3P46736 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
BRCC3P46736 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BRCC3P46736 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
BRCC3P46736 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
BRCC3P46736 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BRCC3P46736 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BRCC3P46736 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BRCC3P46736 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BRCC3P46736 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.93■□□□□ 0.78
BRCC3P46736 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
BRCC3P46736 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.93■□□□□ 0.78
BRCC3P46736 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.93■□□□□ 0.78
BRCC3P46736 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.93■□□□□ 0.78
BRCC3P46736 AC104390.1-201ENST00000555663 520 ntBASIC19.93■□□□□ 0.78
BRCC3P46736 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
BRCC3P46736 AC010240.3-201ENST00000607688 395 ntBASIC19.93■□□□□ 0.78
BRCC3P46736 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.93■□□□□ 0.78
BRCC3P46736 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BRCC3P46736 AC116562.4-201ENST00000641316 2276 ntBASIC19.93■□□□□ 0.78
BRCC3P46736 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
BRCC3P46736 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.93■□□□□ 0.78
BRCC3P46736 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BRCC3P46736 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BRCC3P46736 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
BRCC3P46736 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BRCC3P46736 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
BRCC3P46736 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.93■□□□□ 0.78
BRCC3P46736 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.93■□□□□ 0.78
BRCC3P46736 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
BRCC3P46736 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BRCC3P46736 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.92■□□□□ 0.78
BRCC3P46736 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.92■□□□□ 0.78
BRCC3P46736 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.92■□□□□ 0.78
BRCC3P46736 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BRCC3P46736 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
BRCC3P46736 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.92■□□□□ 0.78
BRCC3P46736 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BRCC3P46736 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
BRCC3P46736 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
BRCC3P46736 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
BRCC3P46736 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.92■□□□□ 0.78
BRCC3P46736 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.92■□□□□ 0.78
BRCC3P46736 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
BRCC3P46736 AL136038.4-201ENST00000603606 1261 ntBASIC19.92■□□□□ 0.78
BRCC3P46736 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
BRCC3P46736 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
BRCC3P46736 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
BRCC3P46736 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BRCC3P46736 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
BRCC3P46736 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BRCC3P46736 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
BRCC3P46736 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
BRCC3P46736 AL391807.1-203ENST00000604392 2365 ntBASIC19.92■□□□□ 0.78
BRCC3P46736 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms