Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHRNA4P43681 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHRNA4P43681 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHRNA4P43681 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.92■□□□□ 0.62
CHRNA4P43681 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHRNA4P43681 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHRNA4P43681 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHRNA4P43681 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.92■□□□□ 0.62
CHRNA4P43681 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHRNA4P43681 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.92■□□□□ 0.62
CHRNA4P43681 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
CHRNA4P43681 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.92■□□□□ 0.62
CHRNA4P43681 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CHRNA4P43681 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.92■□□□□ 0.62
CHRNA4P43681 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.92■□□□□ 0.62
CHRNA4P43681 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.92■□□□□ 0.62
CHRNA4P43681 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.92■□□□□ 0.62
CHRNA4P43681 AL023803.3-201ENST00000615559 522 ntBASIC18.92■□□□□ 0.62
CHRNA4P43681 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHRNA4P43681 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHRNA4P43681 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHRNA4P43681 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CHRNA4P43681 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.92■□□□□ 0.62
CHRNA4P43681 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.92■□□□□ 0.62
CHRNA4P43681 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
CHRNA4P43681 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHRNA4P43681 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.92■□□□□ 0.62
CHRNA4P43681 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHRNA4P43681 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHRNA4P43681 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.92■□□□□ 0.62
CHRNA4P43681 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA4P43681 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA4P43681 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA4P43681 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA4P43681 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA4P43681 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA4P43681 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA4P43681 AC009113.1-201ENST00000570267 2443 ntBASIC18.91■□□□□ 0.62
CHRNA4P43681 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.91■□□□□ 0.62
CHRNA4P43681 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
CHRNA4P43681 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA4P43681 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA4P43681 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA4P43681 INGX-201ENST00000359239 846 ntBASIC18.91■□□□□ 0.62
CHRNA4P43681 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA4P43681 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.91■□□□□ 0.62
CHRNA4P43681 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.91■□□□□ 0.62
CHRNA4P43681 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA4P43681 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA4P43681 NEFHP1-201ENST00000412845 2629 ntBASIC18.91■□□□□ 0.62
CHRNA4P43681 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA4P43681 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.91■□□□□ 0.62
CHRNA4P43681 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.91■□□□□ 0.62
CHRNA4P43681 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA4P43681 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA4P43681 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA4P43681 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA4P43681 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA4P43681 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.91■□□□□ 0.62
CHRNA4P43681 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHRNA4P43681 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHRNA4P43681 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHRNA4P43681 AC005082.1-201ENST00000413042 2259 ntBASIC18.9■□□□□ 0.62
CHRNA4P43681 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHRNA4P43681 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CHRNA4P43681 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CHRNA4P43681 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHRNA4P43681 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.9■□□□□ 0.62
CHRNA4P43681 AC020763.4-201ENST00000623414 4170 ntBASIC18.9■□□□□ 0.62
CHRNA4P43681 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHRNA4P43681 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHRNA4P43681 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHRNA4P43681 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CHRNA4P43681 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.9■□□□□ 0.62
CHRNA4P43681 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.9■□□□□ 0.62
CHRNA4P43681 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CHRNA4P43681 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.9■□□□□ 0.62
CHRNA4P43681 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.9■□□□□ 0.62
CHRNA4P43681 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHRNA4P43681 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CHRNA4P43681 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.9■□□□□ 0.62
CHRNA4P43681 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.9■□□□□ 0.62
CHRNA4P43681 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.9■□□□□ 0.62
CHRNA4P43681 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHRNA4P43681 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHRNA4P43681 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHRNA4P43681 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHRNA4P43681 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.9■□□□□ 0.62
CHRNA4P43681 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHRNA4P43681 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHRNA4P43681 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.9■□□□□ 0.62
CHRNA4P43681 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHRNA4P43681 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.89■□□□□ 0.62
CHRNA4P43681 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
CHRNA4P43681 AC126763.1-201ENST00000552015 2118 ntBASIC18.89■□□□□ 0.62
CHRNA4P43681 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.89■□□□□ 0.62
CHRNA4P43681 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
CHRNA4P43681 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHRNA4P43681 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHRNA4P43681 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms