Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SSR1P43307 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SSR1P43307 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.93■□□□□ 0.78
SSR1P43307 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SSR1P43307 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SSR1P43307 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.93■□□□□ 0.78
SSR1P43307 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SSR1P43307 FAM197Y4-202ENST00000622692 608 ntBASIC19.93■□□□□ 0.78
SSR1P43307 AC131212.4-201ENST00000623606 975 ntBASIC19.93■□□□□ 0.78
SSR1P43307 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SSR1P43307 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SSR1P43307 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SSR1P43307 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SSR1P43307 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
SSR1P43307 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.93■□□□□ 0.78
SSR1P43307 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SSR1P43307 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSR1P43307 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.92■□□□□ 0.78
SSR1P43307 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSR1P43307 AC104581.1-202ENST00000635932 2618 ntBASIC19.92■□□□□ 0.78
SSR1P43307 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSR1P43307 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.92■□□□□ 0.78
SSR1P43307 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SSR1P43307 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSR1P43307 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SSR1P43307 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SSR1P43307 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSR1P43307 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
SSR1P43307 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SSR1P43307 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
SSR1P43307 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.92■□□□□ 0.78
SSR1P43307 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.92■□□□□ 0.78
SSR1P43307 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.92■□□□□ 0.78
SSR1P43307 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSR1P43307 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.92■□□□□ 0.78
SSR1P43307 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.92■□□□□ 0.78
SSR1P43307 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.92■□□□□ 0.78
SSR1P43307 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
SSR1P43307 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SSR1P43307 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.92■□□□□ 0.78
SSR1P43307 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSR1P43307 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.92■□□□□ 0.78
SSR1P43307 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSR1P43307 AC106820.2-201ENST00000563775 3264 ntBASIC19.92■□□□□ 0.78
SSR1P43307 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSR1P43307 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC19.92■□□□□ 0.78
SSR1P43307 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.92■□□□□ 0.78
SSR1P43307 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.92■□□□□ 0.78
SSR1P43307 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SSR1P43307 KRT8P41-201ENST00000533985 1514 ntBASIC19.92■□□□□ 0.78
SSR1P43307 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SSR1P43307 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.91■□□□□ 0.78
SSR1P43307 NEFHP1-201ENST00000412845 2629 ntBASIC19.91■□□□□ 0.78
SSR1P43307 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSR1P43307 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SSR1P43307 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSR1P43307 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.91■□□□□ 0.78
SSR1P43307 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SSR1P43307 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSR1P43307 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSR1P43307 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.91■□□□□ 0.78
SSR1P43307 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSR1P43307 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSR1P43307 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSR1P43307 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.91■□□□□ 0.78
SSR1P43307 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SSR1P43307 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SSR1P43307 RPPH1-201ENST00000516869 333 ntBASIC19.91■□□□□ 0.78
SSR1P43307 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.91■□□□□ 0.78
SSR1P43307 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.91■□□□□ 0.78
SSR1P43307 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.91■□□□□ 0.78
SSR1P43307 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.91■□□□□ 0.78
SSR1P43307 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.91■□□□□ 0.78
SSR1P43307 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.91■□□□□ 0.78
SSR1P43307 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSR1P43307 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSR1P43307 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SSR1P43307 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSR1P43307 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSR1P43307 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSR1P43307 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SSR1P43307 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSR1P43307 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSR1P43307 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SSR1P43307 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SSR1P43307 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSR1P43307 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSR1P43307 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.91■□□□□ 0.78
SSR1P43307 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSR1P43307 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSR1P43307 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
SSR1P43307 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
SSR1P43307 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSR1P43307 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSR1P43307 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSR1P43307 LTB4R2-202ENST00000528054 3092 ntBASIC19.9■□□□□ 0.78
SSR1P43307 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSR1P43307 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSR1P43307 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSR1P43307 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms