Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.88■□□□□ 0.61
CCNFP41002 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCNFP41002 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCNFP41002 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCNFP41002 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCNFP41002 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCNFP41002 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCNFP41002 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CCNFP41002 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCNFP41002 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.88■□□□□ 0.61
CCNFP41002 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCNFP41002 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCNFP41002 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.87■□□□□ 0.61
CCNFP41002 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCNFP41002 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCNFP41002 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCNFP41002 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCNFP41002 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCNFP41002 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CCNFP41002 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCNFP41002 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CCNFP41002 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCNFP41002 NIFKP9-201ENST00000419265 221 ntBASIC18.87■□□□□ 0.61
CCNFP41002 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CCNFP41002 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCNFP41002 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCNFP41002 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCNFP41002 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCNFP41002 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.87■□□□□ 0.61
CCNFP41002 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCNFP41002 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCNFP41002 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.87■□□□□ 0.61
CCNFP41002 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCNFP41002 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.87■□□□□ 0.61
CCNFP41002 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.87■□□□□ 0.61
CCNFP41002 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.87■□□□□ 0.61
CCNFP41002 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.87■□□□□ 0.61
CCNFP41002 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.87■□□□□ 0.61
CCNFP41002 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
CCNFP41002 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCNFP41002 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCNFP41002 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.87■□□□□ 0.61
CCNFP41002 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCNFP41002 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCNFP41002 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCNFP41002 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.86■□□□□ 0.61
CCNFP41002 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCNFP41002 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCNFP41002 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CCNFP41002 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CCNFP41002 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCNFP41002 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCNFP41002 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.86■□□□□ 0.61
CCNFP41002 KSR1P1-201ENST00000446298 240 ntBASIC18.86■□□□□ 0.61
CCNFP41002 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CCNFP41002 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.86■□□□□ 0.61
CCNFP41002 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.86■□□□□ 0.61
CCNFP41002 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CCNFP41002 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCNFP41002 AP001412.1-201ENST00000608405 714 ntBASIC18.86■□□□□ 0.61
CCNFP41002 AL445675.2-201ENST00000620291 557 ntBASIC18.86■□□□□ 0.61
CCNFP41002 HLA-A-209ENST00000638375 975 ntBASIC18.86■□□□□ 0.61
CCNFP41002 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCNFP41002 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.86■□□□□ 0.61
CCNFP41002 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCNFP41002 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCNFP41002 AC020916.1-201ENST00000587762 1774 ntBASIC18.86■□□□□ 0.61
CCNFP41002 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.86■□□□□ 0.61
CCNFP41002 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCNFP41002 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCNFP41002 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCNFP41002 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
CCNFP41002 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CCNFP41002 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCNFP41002 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCNFP41002 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CCNFP41002 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCNFP41002 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CCNFP41002 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCNFP41002 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.85■□□□□ 0.61
CCNFP41002 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCNFP41002 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCNFP41002 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.85■□□□□ 0.61
CCNFP41002 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.85■□□□□ 0.61
CCNFP41002 AF186192.3-201ENST00000583427 947 ntBASIC18.85■□□□□ 0.61
CCNFP41002 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.85■□□□□ 0.61
CCNFP41002 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.85■□□□□ 0.61
CCNFP41002 AC073195.1-201ENST00000607241 877 ntBASIC18.85■□□□□ 0.61
CCNFP41002 AP006294.2-201ENST00000641667 209 ntBASIC18.85■□□□□ 0.61
CCNFP41002 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.85■□□□□ 0.61
CCNFP41002 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCNFP41002 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.85■□□□□ 0.61
CCNFP41002 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.85■□□□□ 0.61
CCNFP41002 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCNFP41002 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCNFP41002 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCNFP41002 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCNFP41002 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCNFP41002 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCNFP41002 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms