Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.42■□□□□ 0.7
HOXC13P31276 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.42■□□□□ 0.7
HOXC13P31276 GCSHP2-201ENST00000560971 527 ntBASIC19.42■□□□□ 0.7
HOXC13P31276 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
HOXC13P31276 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
HOXC13P31276 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC13P31276 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC13P31276 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC13P31276 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC13P31276 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.42■□□□□ 0.7
HOXC13P31276 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC13P31276 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC13P31276 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC13P31276 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC13P31276 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC13P31276 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC13P31276 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.41■□□□□ 0.7
HOXC13P31276 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXC13P31276 AC093525.10-201ENST00000625130 1569 ntBASIC19.41■□□□□ 0.7
HOXC13P31276 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC13P31276 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC13P31276 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC13P31276 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
HOXC13P31276 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC13P31276 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.41■□□□□ 0.7
HOXC13P31276 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.41■□□□□ 0.7
HOXC13P31276 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
HOXC13P31276 SPDYE15P-201ENST00000424157 909 ntBASIC19.41■□□□□ 0.7
HOXC13P31276 AC246785.2-201ENST00000432512 513 ntBASIC19.41■□□□□ 0.7
HOXC13P31276 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.41■□□□□ 0.7
HOXC13P31276 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.41■□□□□ 0.7
HOXC13P31276 MIR4674-201ENST00000582457 87 ntBASIC19.41■□□□□ 0.7
HOXC13P31276 AC069148.1-201ENST00000608741 768 ntBASIC19.41■□□□□ 0.7
HOXC13P31276 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC13P31276 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.41■□□□□ 0.7
HOXC13P31276 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC13P31276 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HOXC13P31276 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC13P31276 AC098818.2-201ENST00000564925 2320 ntBASIC19.41■□□□□ 0.7
HOXC13P31276 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC13P31276 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC13P31276 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.41■□□□□ 0.7
HOXC13P31276 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC13P31276 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXC13P31276 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
HOXC13P31276 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.4■□□□□ 0.7
HOXC13P31276 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HOXC13P31276 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC13P31276 HEIH-201ENST00000623091 1652 ntBASIC19.4■□□□□ 0.7
HOXC13P31276 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC13P31276 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC13P31276 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC13P31276 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC13P31276 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.4■□□□□ 0.7
HOXC13P31276 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC13P31276 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC13P31276 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC13P31276 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.4■□□□□ 0.7
HOXC13P31276 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.4■□□□□ 0.7
HOXC13P31276 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.4■□□□□ 0.7
HOXC13P31276 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC13P31276 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HOXC13P31276 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.4■□□□□ 0.7
HOXC13P31276 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
HOXC13P31276 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC13P31276 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
HOXC13P31276 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC13P31276 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
HOXC13P31276 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
HOXC13P31276 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC13P31276 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
HOXC13P31276 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC13P31276 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.4■□□□□ 0.7
HOXC13P31276 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
HOXC13P31276 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HOXC13P31276 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC13P31276 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
HOXC13P31276 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.39■□□□□ 0.69
HOXC13P31276 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC13P31276 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.39■□□□□ 0.69
HOXC13P31276 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC13P31276 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.39■□□□□ 0.69
HOXC13P31276 AL136038.3-201ENST00000561909 1096 ntBASIC19.39■□□□□ 0.69
HOXC13P31276 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.39■□□□□ 0.69
HOXC13P31276 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC13P31276 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.39■□□□□ 0.69
HOXC13P31276 AL031432.5-201ENST00000641059 760 ntBASIC19.39■□□□□ 0.69
HOXC13P31276 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
HOXC13P31276 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC13P31276 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.39■□□□□ 0.69
HOXC13P31276 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC13P31276 CROCCP3-202ENST00000420820 1947 ntBASIC19.39■□□□□ 0.69
HOXC13P31276 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC13P31276 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC13P31276 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC13P31276 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC13P31276 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.39■□□□□ 0.69
HOXC13P31276 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
HOXC13P31276 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXC13P31276 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms