Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC12P31275 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HOXC12P31275 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC12P31275 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HOXC12P31275 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
HOXC12P31275 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC12P31275 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC12P31275 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.65■□□□□ 0.26
HOXC12P31275 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC12P31275 AC009947.2-201ENST00000444014 672 ntBASIC16.65■□□□□ 0.26
HOXC12P31275 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC12P31275 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.65■□□□□ 0.26
HOXC12P31275 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HOXC12P31275 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC12P31275 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC12P31275 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
HOXC12P31275 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
HOXC12P31275 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC12P31275 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC12P31275 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC12P31275 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC12P31275 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC12P31275 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC12P31275 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.64■□□□□ 0.25
HOXC12P31275 CROCCP1-201ENST00000426910 5675 ntBASIC16.64■□□□□ 0.25
HOXC12P31275 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC12P31275 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC12P31275 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HOXC12P31275 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.64■□□□□ 0.25
HOXC12P31275 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC12P31275 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC12P31275 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.64■□□□□ 0.25
HOXC12P31275 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.64■□□□□ 0.25
HOXC12P31275 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.64■□□□□ 0.25
HOXC12P31275 INGX-201ENST00000359239 846 ntBASIC16.64■□□□□ 0.25
HOXC12P31275 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.64■□□□□ 0.25
HOXC12P31275 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC12P31275 RNF152P1-201ENST00000397754 604 ntBASIC16.64■□□□□ 0.25
HOXC12P31275 KRT18P48-201ENST00000434763 852 ntBASIC16.64■□□□□ 0.25
HOXC12P31275 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.64■□□□□ 0.25
HOXC12P31275 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.64■□□□□ 0.25
HOXC12P31275 AL512604.3-201ENST00000569583 964 ntBASIC16.64■□□□□ 0.25
HOXC12P31275 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.64■□□□□ 0.25
HOXC12P31275 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.64■□□□□ 0.25
HOXC12P31275 AP000550.4-202ENST00000639755 178 ntBASIC16.64■□□□□ 0.25
HOXC12P31275 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.64■□□□□ 0.25
HOXC12P31275 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC12P31275 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HOXC12P31275 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC12P31275 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.64■□□□□ 0.25
HOXC12P31275 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HOXC12P31275 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC12P31275 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
HOXC12P31275 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC12P31275 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC12P31275 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.63■□□□□ 0.25
HOXC12P31275 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC12P31275 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC12P31275 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
HOXC12P31275 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC12P31275 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC12P31275 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC12P31275 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.63■□□□□ 0.25
HOXC12P31275 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
HOXC12P31275 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
HOXC12P31275 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC12P31275 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC12P31275 HMGA1P5-201ENST00000412453 271 ntBASIC16.63■□□□□ 0.25
HOXC12P31275 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.63■□□□□ 0.25
HOXC12P31275 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC12P31275 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.63■□□□□ 0.25
HOXC12P31275 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.63■□□□□ 0.25
HOXC12P31275 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
HOXC12P31275 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.63■□□□□ 0.25
HOXC12P31275 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC12P31275 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC12P31275 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HOXC12P31275 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.63■□□□□ 0.25
HOXC12P31275 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HOXC12P31275 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC12P31275 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.63■□□□□ 0.25
HOXC12P31275 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC12P31275 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
HOXC12P31275 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC12P31275 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
HOXC12P31275 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.62■□□□□ 0.25
HOXC12P31275 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC12P31275 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC12P31275 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC12P31275 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.62■□□□□ 0.25
HOXC12P31275 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC12P31275 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.62■□□□□ 0.25
HOXC12P31275 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.62■□□□□ 0.25
HOXC12P31275 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC12P31275 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.62■□□□□ 0.25
HOXC12P31275 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC12P31275 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC12P31275 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.62■□□□□ 0.25
HOXC12P31275 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.62■□□□□ 0.25
HOXC12P31275 AC010653.2-201ENST00000623505 997 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms