Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
EPHA3P29320 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.26■□□□□ 0.51
EPHA3P29320 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.26■□□□□ 0.51
EPHA3P29320 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
EPHA3P29320 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
EPHA3P29320 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
EPHA3P29320 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EPHA3P29320 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EPHA3P29320 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.26■□□□□ 0.51
EPHA3P29320 TSPY6P-201ENST00000448518 926 ntBASIC18.26■□□□□ 0.51
EPHA3P29320 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
EPHA3P29320 AL137784.2-201ENST00000607332 1000 ntBASIC18.26■□□□□ 0.51
EPHA3P29320 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EPHA3P29320 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EPHA3P29320 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.26■□□□□ 0.51
EPHA3P29320 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EPHA3P29320 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EPHA3P29320 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
EPHA3P29320 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.26■□□□□ 0.51
EPHA3P29320 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
EPHA3P29320 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.26■□□□□ 0.51
EPHA3P29320 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.26■□□□□ 0.51
EPHA3P29320 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.26■□□□□ 0.51
EPHA3P29320 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.26■□□□□ 0.51
EPHA3P29320 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
EPHA3P29320 RCC2P6-201ENST00000526625 1557 ntBASIC18.25■□□□□ 0.51
EPHA3P29320 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EPHA3P29320 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.25■□□□□ 0.51
EPHA3P29320 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
EPHA3P29320 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
EPHA3P29320 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EPHA3P29320 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.25■□□□□ 0.51
EPHA3P29320 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EPHA3P29320 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
EPHA3P29320 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
EPHA3P29320 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
EPHA3P29320 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.25■□□□□ 0.51
EPHA3P29320 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EPHA3P29320 AC135776.1-201ENST00000319817 2481 ntBASIC18.25■□□□□ 0.51
EPHA3P29320 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
EPHA3P29320 MTMR9LP-203ENST00000426597 1545 ntBASIC18.25■□□□□ 0.51
EPHA3P29320 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.25■□□□□ 0.51
EPHA3P29320 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EPHA3P29320 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EPHA3P29320 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.25■□□□□ 0.51
EPHA3P29320 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.25■□□□□ 0.51
EPHA3P29320 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.25■□□□□ 0.51
EPHA3P29320 AC083880.1-201ENST00000608266 535 ntBASIC18.25■□□□□ 0.51
EPHA3P29320 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.25■□□□□ 0.51
EPHA3P29320 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EPHA3P29320 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EPHA3P29320 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
EPHA3P29320 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
EPHA3P29320 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
EPHA3P29320 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.25■□□□□ 0.51
EPHA3P29320 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
EPHA3P29320 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
EPHA3P29320 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
EPHA3P29320 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
EPHA3P29320 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.25■□□□□ 0.51
EPHA3P29320 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
EPHA3P29320 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EPHA3P29320 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.25■□□□□ 0.51
EPHA3P29320 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
EPHA3P29320 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.25■□□□□ 0.51
EPHA3P29320 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
EPHA3P29320 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
EPHA3P29320 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
EPHA3P29320 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
EPHA3P29320 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
EPHA3P29320 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.24■□□□□ 0.51
EPHA3P29320 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EPHA3P29320 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EPHA3P29320 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
EPHA3P29320 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
EPHA3P29320 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EPHA3P29320 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
EPHA3P29320 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
EPHA3P29320 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.24■□□□□ 0.51
EPHA3P29320 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
EPHA3P29320 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
EPHA3P29320 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.24■□□□□ 0.51
EPHA3P29320 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EPHA3P29320 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EPHA3P29320 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EPHA3P29320 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
EPHA3P29320 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
EPHA3P29320 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EPHA3P29320 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.24■□□□□ 0.51
EPHA3P29320 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EPHA3P29320 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.24■□□□□ 0.51
EPHA3P29320 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
EPHA3P29320 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
EPHA3P29320 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
EPHA3P29320 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EPHA3P29320 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.23■□□□□ 0.51
EPHA3P29320 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.23■□□□□ 0.51
EPHA3P29320 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.23■□□□□ 0.51
EPHA3P29320 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
EPHA3P29320 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms