Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC020763.4-201ENST00000623414 4170 ntBASIC19.08■□□□□ 0.65
NFKB1P19838 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NFKB1P19838 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NFKB1P19838 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NFKB1P19838 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.08■□□□□ 0.65
NFKB1P19838 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.08■□□□□ 0.65
NFKB1P19838 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NFKB1P19838 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NFKB1P19838 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.08■□□□□ 0.65
NFKB1P19838 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NFKB1P19838 AC009113.1-201ENST00000570267 2443 ntBASIC19.08■□□□□ 0.64
NFKB1P19838 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
NFKB1P19838 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NFKB1P19838 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.08■□□□□ 0.64
NFKB1P19838 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NFKB1P19838 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
NFKB1P19838 AL390955.1-201ENST00000428694 934 ntBASIC19.08■□□□□ 0.64
NFKB1P19838 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NFKB1P19838 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
NFKB1P19838 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.08■□□□□ 0.64
NFKB1P19838 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
NFKB1P19838 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
NFKB1P19838 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
NFKB1P19838 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
NFKB1P19838 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.08■□□□□ 0.64
NFKB1P19838 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
NFKB1P19838 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NFKB1P19838 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.08■□□□□ 0.64
NFKB1P19838 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NFKB1P19838 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NFKB1P19838 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NFKB1P19838 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NFKB1P19838 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NFKB1P19838 AL499627.1-201ENST00000569373 2188 ntBASIC19.08■□□□□ 0.64
NFKB1P19838 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NFKB1P19838 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.07■□□□□ 0.64
NFKB1P19838 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NFKB1P19838 AL357033.4-201ENST00000617703 1807 ntBASIC19.07■□□□□ 0.64
NFKB1P19838 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NFKB1P19838 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NFKB1P19838 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
NFKB1P19838 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.07■□□□□ 0.64
NFKB1P19838 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NFKB1P19838 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.07■□□□□ 0.64
NFKB1P19838 MIR4497-201ENST00000583208 89 ntBASIC19.07■□□□□ 0.64
NFKB1P19838 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NFKB1P19838 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NFKB1P19838 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.07■□□□□ 0.64
NFKB1P19838 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.07■□□□□ 0.64
NFKB1P19838 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
NFKB1P19838 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NFKB1P19838 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.07■□□□□ 0.64
NFKB1P19838 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.07■□□□□ 0.64
NFKB1P19838 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NFKB1P19838 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
NFKB1P19838 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
NFKB1P19838 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
NFKB1P19838 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NFKB1P19838 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.06■□□□□ 0.64
NFKB1P19838 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NFKB1P19838 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NFKB1P19838 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.06■□□□□ 0.64
NFKB1P19838 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NFKB1P19838 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
NFKB1P19838 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NFKB1P19838 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
NFKB1P19838 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NFKB1P19838 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NFKB1P19838 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NFKB1P19838 GPAT2P1-201ENST00000444924 1672 ntBASIC19.06■□□□□ 0.64
NFKB1P19838 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NFKB1P19838 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NFKB1P19838 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NFKB1P19838 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.06■□□□□ 0.64
NFKB1P19838 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NFKB1P19838 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.06■□□□□ 0.64
NFKB1P19838 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.06■□□□□ 0.64
NFKB1P19838 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.06■□□□□ 0.64
NFKB1P19838 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NFKB1P19838 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.06■□□□□ 0.64
NFKB1P19838 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.06■□□□□ 0.64
NFKB1P19838 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.05■□□□□ 0.64
NFKB1P19838 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NFKB1P19838 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
NFKB1P19838 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NFKB1P19838 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NFKB1P19838 KRT17P2-201ENST00000300992 1314 ntBASIC19.05■□□□□ 0.64
NFKB1P19838 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NFKB1P19838 AC008556.1-201ENST00000610908 2040 ntBASIC19.05■□□□□ 0.64
NFKB1P19838 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NFKB1P19838 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NFKB1P19838 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.05■□□□□ 0.64
NFKB1P19838 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NFKB1P19838 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NFKB1P19838 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NFKB1P19838 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NFKB1P19838 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
NFKB1P19838 AL023284.2-201ENST00000405850 579 ntBASIC19.05■□□□□ 0.64
NFKB1P19838 TSPY15P-201ENST00000457163 923 ntBASIC19.05■□□□□ 0.64
NFKB1P19838 CA15P1-201ENST00000481698 905 ntBASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms