Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ERCC2P18074 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ERCC2P18074 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ERCC2P18074 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.29■□□□□ 0.68
ERCC2P18074 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
ERCC2P18074 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ERCC2P18074 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ERCC2P18074 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
ERCC2P18074 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ERCC2P18074 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
ERCC2P18074 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.28■□□□□ 0.68
ERCC2P18074 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
ERCC2P18074 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ERCC2P18074 AC087499.1-201ENST00000418141 1075 ntBASIC19.28■□□□□ 0.68
ERCC2P18074 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.28■□□□□ 0.68
ERCC2P18074 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.28■□□□□ 0.68
ERCC2P18074 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.28■□□□□ 0.68
ERCC2P18074 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
ERCC2P18074 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ERCC2P18074 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ERCC2P18074 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.28■□□□□ 0.68
ERCC2P18074 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
ERCC2P18074 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ERCC2P18074 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
ERCC2P18074 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ERCC2P18074 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ERCC2P18074 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ERCC2P18074 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ERCC2P18074 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ERCC2P18074 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ERCC2P18074 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ERCC2P18074 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ERCC2P18074 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ERCC2P18074 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.27■□□□□ 0.68
ERCC2P18074 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ERCC2P18074 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.27■□□□□ 0.68
ERCC2P18074 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.27■□□□□ 0.68
ERCC2P18074 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ERCC2P18074 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
ERCC2P18074 AC010653.2-201ENST00000623505 997 ntBASIC19.27■□□□□ 0.68
ERCC2P18074 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ERCC2P18074 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ERCC2P18074 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ERCC2P18074 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
ERCC2P18074 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.27■□□□□ 0.68
ERCC2P18074 WIZP1-201ENST00000531444 2299 ntBASIC19.27■□□□□ 0.68
ERCC2P18074 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ERCC2P18074 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
ERCC2P18074 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.26■□□□□ 0.67
ERCC2P18074 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ERCC2P18074 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ERCC2P18074 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.26■□□□□ 0.67
ERCC2P18074 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
ERCC2P18074 AL499627.1-201ENST00000569373 2188 ntBASIC19.26■□□□□ 0.67
ERCC2P18074 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
ERCC2P18074 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ERCC2P18074 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ERCC2P18074 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.26■□□□□ 0.67
ERCC2P18074 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ERCC2P18074 AC128688.1-201ENST00000487626 519 ntBASIC19.26■□□□□ 0.67
ERCC2P18074 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
ERCC2P18074 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ERCC2P18074 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ERCC2P18074 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ERCC2P18074 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ERCC2P18074 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ERCC2P18074 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ERCC2P18074 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.25■□□□□ 0.67
ERCC2P18074 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERCC2P18074 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERCC2P18074 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERCC2P18074 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERCC2P18074 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERCC2P18074 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ERCC2P18074 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERCC2P18074 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERCC2P18074 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.25■□□□□ 0.67
ERCC2P18074 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
ERCC2P18074 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERCC2P18074 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERCC2P18074 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERCC2P18074 LINC01568-207ENST00000641790 1380 ntBASIC19.25■□□□□ 0.67
ERCC2P18074 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERCC2P18074 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ERCC2P18074 MIR564-202ENST00000385049 94 ntBASIC19.25■□□□□ 0.67
ERCC2P18074 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
ERCC2P18074 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERCC2P18074 ECEL1P2-202ENST00000465689 757 ntBASIC19.25■□□□□ 0.67
ERCC2P18074 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.25■□□□□ 0.67
ERCC2P18074 MIR3180-5-201ENST00000583743 153 ntBASIC19.25■□□□□ 0.67
ERCC2P18074 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.25■□□□□ 0.67
ERCC2P18074 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
ERCC2P18074 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
ERCC2P18074 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERCC2P18074 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERCC2P18074 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.25■□□□□ 0.67
ERCC2P18074 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.25■□□□□ 0.67
ERCC2P18074 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ERCC2P18074 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.25■□□□□ 0.67
ERCC2P18074 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms