Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 AC141586.3-201ENST00000562166 1838 ntBASIC20.88■□□□□ 0.93
SMPD1P17405 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMPD1P17405 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SMPD1P17405 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMPD1P17405 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.87■□□□□ 0.93
SMPD1P17405 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.87■□□□□ 0.93
SMPD1P17405 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SMPD1P17405 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.87■□□□□ 0.93
SMPD1P17405 AC091304.2-201ENST00000564639 760 ntBASIC20.87■□□□□ 0.93
SMPD1P17405 MIR3180-4-201ENST00000582223 153 ntBASIC20.87■□□□□ 0.93
SMPD1P17405 AC090616.6-201ENST00000582640 721 ntBASIC20.87■□□□□ 0.93
SMPD1P17405 IGHV3-41-201ENST00000613121 348 ntBASIC20.87■□□□□ 0.93
SMPD1P17405 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.87■□□□□ 0.93
SMPD1P17405 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMPD1P17405 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SMPD1P17405 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SMPD1P17405 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMPD1P17405 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMPD1P17405 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SMPD1P17405 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.87■□□□□ 0.93
SMPD1P17405 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.87■□□□□ 0.93
SMPD1P17405 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMPD1P17405 AL158211.5-201ENST00000623583 2518 ntBASIC20.86■□□□□ 0.93
SMPD1P17405 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.86■□□□□ 0.93
SMPD1P17405 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMPD1P17405 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMPD1P17405 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.86■□□□□ 0.93
SMPD1P17405 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMPD1P17405 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMPD1P17405 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.86■□□□□ 0.93
SMPD1P17405 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.86■□□□□ 0.93
SMPD1P17405 AL121772.3-201ENST00000610840 674 ntBASIC20.86■□□□□ 0.93
SMPD1P17405 AC068587.9-201ENST00000641814 219 ntBASIC20.86■□□□□ 0.93
SMPD1P17405 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SMPD1P17405 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.86■□□□□ 0.93
SMPD1P17405 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMPD1P17405 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.86■□□□□ 0.93
SMPD1P17405 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMPD1P17405 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMPD1P17405 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMPD1P17405 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.86■□□□□ 0.93
SMPD1P17405 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SMPD1P17405 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMPD1P17405 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMPD1P17405 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.85■□□□□ 0.93
SMPD1P17405 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
SMPD1P17405 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMPD1P17405 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SMPD1P17405 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SMPD1P17405 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMPD1P17405 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SMPD1P17405 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.85■□□□□ 0.93
SMPD1P17405 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMPD1P17405 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.85■□□□□ 0.93
SMPD1P17405 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.85■□□□□ 0.93
SMPD1P17405 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.85■□□□□ 0.93
SMPD1P17405 AC009078.2-202ENST00000463353 338 ntBASIC20.85■□□□□ 0.93
SMPD1P17405 KRT18P31-201ENST00000506277 1292 ntBASIC20.85■□□□□ 0.93
SMPD1P17405 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.85■□□□□ 0.93
SMPD1P17405 AC104692.2-201ENST00000603054 253 ntBASIC20.85■□□□□ 0.93
SMPD1P17405 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SMPD1P17405 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMPD1P17405 AL031008.1-201ENST00000619963 541 ntBASIC20.85■□□□□ 0.93
SMPD1P17405 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SMPD1P17405 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMPD1P17405 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.85■□□□□ 0.93
SMPD1P17405 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SMPD1P17405 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SMPD1P17405 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SMPD1P17405 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SMPD1P17405 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMPD1P17405 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SMPD1P17405 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMPD1P17405 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SMPD1P17405 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SMPD1P17405 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMPD1P17405 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMPD1P17405 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMPD1P17405 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.84■□□□□ 0.93
SMPD1P17405 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMPD1P17405 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMPD1P17405 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SMPD1P17405 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.84■□□□□ 0.93
SMPD1P17405 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMPD1P17405 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMPD1P17405 AP000347.1-202ENST00000435868 847 ntBASIC20.84■□□□□ 0.93
SMPD1P17405 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMPD1P17405 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.84■□□□□ 0.93
SMPD1P17405 GPR32P1-201ENST00000601788 811 ntBASIC20.84■□□□□ 0.93
SMPD1P17405 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMPD1P17405 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMPD1P17405 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.84■□□□□ 0.93
SMPD1P17405 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SMPD1P17405 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMPD1P17405 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.84■□□□□ 0.93
SMPD1P17405 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMPD1P17405 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SMPD1P17405 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.84■□□□□ 0.93
SMPD1P17405 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMPD1P17405 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms