Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
NCK1P16333 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NCK1P16333 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
NCK1P16333 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NCK1P16333 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NCK1P16333 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NCK1P16333 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NCK1P16333 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
NCK1P16333 AC091874.3-201ENST00000512672 1195 ntBASIC17.73■□□□□ 0.43
NCK1P16333 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.73■□□□□ 0.43
NCK1P16333 AC022517.1-201ENST00000592429 346 ntBASIC17.73■□□□□ 0.43
NCK1P16333 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NCK1P16333 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NCK1P16333 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
NCK1P16333 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.73■□□□□ 0.43
NCK1P16333 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.73■□□□□ 0.43
NCK1P16333 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.73■□□□□ 0.43
NCK1P16333 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
NCK1P16333 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.73■□□□□ 0.43
NCK1P16333 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NCK1P16333 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
NCK1P16333 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NCK1P16333 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
NCK1P16333 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.72■□□□□ 0.43
NCK1P16333 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NCK1P16333 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NCK1P16333 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NCK1P16333 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NCK1P16333 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.72■□□□□ 0.43
NCK1P16333 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
NCK1P16333 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NCK1P16333 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NCK1P16333 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NCK1P16333 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NCK1P16333 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
NCK1P16333 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
NCK1P16333 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.72■□□□□ 0.43
NCK1P16333 HEIH-201ENST00000623091 1652 ntBASIC17.72■□□□□ 0.43
NCK1P16333 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
NCK1P16333 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NCK1P16333 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
NCK1P16333 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.72■□□□□ 0.43
NCK1P16333 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.72■□□□□ 0.43
NCK1P16333 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.72■□□□□ 0.43
NCK1P16333 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.72■□□□□ 0.43
NCK1P16333 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.72■□□□□ 0.43
NCK1P16333 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.72■□□□□ 0.43
NCK1P16333 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.72■□□□□ 0.43
NCK1P16333 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.72■□□□□ 0.43
NCK1P16333 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.72■□□□□ 0.43
NCK1P16333 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.72■□□□□ 0.43
NCK1P16333 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.72■□□□□ 0.43
NCK1P16333 AC139713.2-201ENST00000641328 2723 ntBASIC17.72■□□□□ 0.43
NCK1P16333 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NCK1P16333 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NCK1P16333 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.72■□□□□ 0.43
NCK1P16333 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NCK1P16333 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NCK1P16333 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NCK1P16333 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.72■□□□□ 0.43
NCK1P16333 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
NCK1P16333 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.72■□□□□ 0.43
NCK1P16333 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NCK1P16333 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.71■□□□□ 0.43
NCK1P16333 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NCK1P16333 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NCK1P16333 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NCK1P16333 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.71■□□□□ 0.43
NCK1P16333 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.71■□□□□ 0.43
NCK1P16333 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NCK1P16333 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.71■□□□□ 0.43
NCK1P16333 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.71■□□□□ 0.43
NCK1P16333 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
NCK1P16333 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
NCK1P16333 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NCK1P16333 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.71■□□□□ 0.43
NCK1P16333 CDCA4P2-201ENST00000441182 718 ntBASIC17.71■□□□□ 0.43
NCK1P16333 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.71■□□□□ 0.43
NCK1P16333 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.71■□□□□ 0.43
NCK1P16333 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.71■□□□□ 0.43
NCK1P16333 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.71■□□□□ 0.43
NCK1P16333 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.71■□□□□ 0.43
NCK1P16333 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.71■□□□□ 0.43
NCK1P16333 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.71■□□□□ 0.43
NCK1P16333 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.71■□□□□ 0.43
NCK1P16333 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.71■□□□□ 0.43
NCK1P16333 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
NCK1P16333 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NCK1P16333 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NCK1P16333 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.71■□□□□ 0.43
NCK1P16333 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NCK1P16333 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NCK1P16333 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
NCK1P16333 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NCK1P16333 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NCK1P16333 AC134043.2-201ENST00000624206 2238 ntBASIC17.7■□□□□ 0.42
NCK1P16333 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NCK1P16333 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
NCK1P16333 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.7■□□□□ 0.42
NCK1P16333 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms