Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMIM17P0DL12 WIZP1-201ENST00000531444 2299 ntBASIC13.97□□□□□ -0.17
SMIM17P0DL12 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SMIM17P0DL12 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMIM17P0DL12 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SMIM17P0DL12 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC13.97□□□□□ -0.17
SMIM17P0DL12 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMIM17P0DL12 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMIM17P0DL12 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
SMIM17P0DL12 Z98044.1-201ENST00000632503 1764 ntBASIC13.96□□□□□ -0.17
SMIM17P0DL12 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
SMIM17P0DL12 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SMIM17P0DL12 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMIM17P0DL12 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SMIM17P0DL12 USP39-202ENST00000409025 1946 ntTSL 5 BASIC13.96□□□□□ -0.17
SMIM17P0DL12 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SMIM17P0DL12 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
SMIM17P0DL12 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SMIM17P0DL12 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMIM17P0DL12 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
SMIM17P0DL12 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC13.96□□□□□ -0.17
SMIM17P0DL12 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SMIM17P0DL12 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC13.96□□□□□ -0.17
SMIM17P0DL12 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMIM17P0DL12 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMIM17P0DL12 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC13.96□□□□□ -0.17
SMIM17P0DL12 ZNRF2P3-201ENST00000424200 374 ntBASIC13.96□□□□□ -0.17
SMIM17P0DL12 CNN2P6-201ENST00000439038 900 ntBASIC13.96□□□□□ -0.17
SMIM17P0DL12 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SMIM17P0DL12 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC13.96□□□□□ -0.17
SMIM17P0DL12 ISCU-212ENST00000547005 795 ntTSL 3 BASIC13.96□□□□□ -0.17
SMIM17P0DL12 DUX4L16-201ENST00000555130 1264 ntBASIC13.96□□□□□ -0.17
SMIM17P0DL12 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SMIM17P0DL12 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC13.96□□□□□ -0.17
SMIM17P0DL12 AC011767.1-201ENST00000617410 1153 ntBASIC13.96□□□□□ -0.17
SMIM17P0DL12 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC13.96□□□□□ -0.17
SMIM17P0DL12 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMIM17P0DL12 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC13.96□□□□□ -0.17
SMIM17P0DL12 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMIM17P0DL12 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMIM17P0DL12 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC13.96□□□□□ -0.17
SMIM17P0DL12 AC010980.2-201ENST00000587099 1412 ntBASIC13.96□□□□□ -0.18
SMIM17P0DL12 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.96□□□□□ -0.18
SMIM17P0DL12 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC13.96□□□□□ -0.18
SMIM17P0DL12 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.96□□□□□ -0.18
SMIM17P0DL12 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SMIM17P0DL12 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SMIM17P0DL12 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC13.96□□□□□ -0.18
SMIM17P0DL12 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
SMIM17P0DL12 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
SMIM17P0DL12 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMIM17P0DL12 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
SMIM17P0DL12 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMIM17P0DL12 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SMIM17P0DL12 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMIM17P0DL12 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SMIM17P0DL12 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
SMIM17P0DL12 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC13.95□□□□□ -0.18
SMIM17P0DL12 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SMIM17P0DL12 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
SMIM17P0DL12 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMIM17P0DL12 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMIM17P0DL12 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SMIM17P0DL12 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC13.95□□□□□ -0.18
SMIM17P0DL12 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMIM17P0DL12 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SMIM17P0DL12 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC13.95□□□□□ -0.18
SMIM17P0DL12 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
SMIM17P0DL12 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC13.95□□□□□ -0.18
SMIM17P0DL12 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SMIM17P0DL12 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC13.95□□□□□ -0.18
SMIM17P0DL12 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SMIM17P0DL12 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMIM17P0DL12 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SMIM17P0DL12 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMIM17P0DL12 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SMIM17P0DL12 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMIM17P0DL12 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
SMIM17P0DL12 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC13.95□□□□□ -0.18
SMIM17P0DL12 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMIM17P0DL12 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC13.95□□□□□ -0.18
SMIM17P0DL12 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SMIM17P0DL12 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMIM17P0DL12 MOK-233ENST00000524214 1539 ntTSL 2 BASIC13.95□□□□□ -0.18
SMIM17P0DL12 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC13.95□□□□□ -0.18
SMIM17P0DL12 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMIM17P0DL12 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMIM17P0DL12 BICD1-207ENST00000551848 1962 ntBASIC13.94□□□□□ -0.18
SMIM17P0DL12 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SMIM17P0DL12 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMIM17P0DL12 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMIM17P0DL12 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
SMIM17P0DL12 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.94□□□□□ -0.18
SMIM17P0DL12 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMIM17P0DL12 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMIM17P0DL12 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMIM17P0DL12 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SMIM17P0DL12 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMIM17P0DL12 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SMIM17P0DL12 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms