Protein–RNA interactions for Protein: P09486

SPARC, SPARC, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCP09486 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SPARCP09486 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SPARCP09486 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SPARCP09486 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.72■□□□□ 0.27
SPARCP09486 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SPARCP09486 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.72■□□□□ 0.27
SPARCP09486 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SPARCP09486 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SPARCP09486 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SPARCP09486 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.71■□□□□ 0.27
SPARCP09486 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SPARCP09486 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SPARCP09486 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SPARCP09486 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SPARCP09486 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.71■□□□□ 0.27
SPARCP09486 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
SPARCP09486 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SPARCP09486 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.71■□□□□ 0.27
SPARCP09486 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SPARCP09486 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SPARCP09486 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SPARCP09486 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SPARCP09486 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SPARCP09486 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.71■□□□□ 0.27
SPARCP09486 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SPARCP09486 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.71■□□□□ 0.27
SPARCP09486 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.71■□□□□ 0.27
SPARCP09486 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SPARCP09486 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.71■□□□□ 0.27
SPARCP09486 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.71■□□□□ 0.27
SPARCP09486 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SPARCP09486 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.71■□□□□ 0.27
SPARCP09486 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
SPARCP09486 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.71■□□□□ 0.27
SPARCP09486 AC006058.3-201ENST00000606217 1069 ntBASIC16.71■□□□□ 0.27
SPARCP09486 AC110285.5-201ENST00000611501 352 ntBASIC16.71■□□□□ 0.27
SPARCP09486 AC131212.4-201ENST00000623606 975 ntBASIC16.71■□□□□ 0.27
SPARCP09486 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SPARCP09486 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SPARCP09486 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SPARCP09486 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SPARCP09486 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SPARCP09486 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SPARCP09486 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
SPARCP09486 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.71■□□□□ 0.27
SPARCP09486 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SPARCP09486 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SPARCP09486 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.7■□□□□ 0.26
SPARCP09486 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.7■□□□□ 0.26
SPARCP09486 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SPARCP09486 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SPARCP09486 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SPARCP09486 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SPARCP09486 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SPARCP09486 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.7■□□□□ 0.26
SPARCP09486 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SPARCP09486 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SPARCP09486 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.7■□□□□ 0.26
SPARCP09486 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SPARCP09486 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SPARCP09486 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SPARCP09486 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.7■□□□□ 0.26
SPARCP09486 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SPARCP09486 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SPARCP09486 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SPARCP09486 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.7■□□□□ 0.26
SPARCP09486 RN7SL471P-201ENST00000580476 299 ntBASIC16.7■□□□□ 0.26
SPARCP09486 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SPARCP09486 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SPARCP09486 AC073648.6-201ENST00000641589 218 ntBASIC16.7■□□□□ 0.26
SPARCP09486 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SPARCP09486 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.7■□□□□ 0.26
SPARCP09486 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.69■□□□□ 0.26
SPARCP09486 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.69■□□□□ 0.26
SPARCP09486 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SPARCP09486 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.69■□□□□ 0.26
SPARCP09486 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SPARCP09486 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.69■□□□□ 0.26
SPARCP09486 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SPARCP09486 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SPARCP09486 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SPARCP09486 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SPARCP09486 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SPARCP09486 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SPARCP09486 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.69■□□□□ 0.26
SPARCP09486 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.69■□□□□ 0.26
SPARCP09486 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
SPARCP09486 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SPARCP09486 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.69■□□□□ 0.26
SPARCP09486 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.69■□□□□ 0.26
SPARCP09486 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.69■□□□□ 0.26
SPARCP09486 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SPARCP09486 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.69■□□□□ 0.26
SPARCP09486 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SPARCP09486 AP002982.1-201ENST00000492365 877 ntBASIC16.69■□□□□ 0.26
SPARCP09486 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.69■□□□□ 0.26
SPARCP09486 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.69■□□□□ 0.26
SPARCP09486 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.69■□□□□ 0.26
SPARCP09486 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.69■□□□□ 0.26
SPARCP09486 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms