Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MMP2P08253 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
MMP2P08253 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MMP2P08253 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
MMP2P08253 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MMP2P08253 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MMP2P08253 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.86■□□□□ 0.61
MMP2P08253 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.86■□□□□ 0.61
MMP2P08253 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MMP2P08253 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
MMP2P08253 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MMP2P08253 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MMP2P08253 AC211429.1-201ENST00000415277 523 ntBASIC18.86■□□□□ 0.61
MMP2P08253 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MMP2P08253 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
MMP2P08253 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MMP2P08253 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
MMP2P08253 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
MMP2P08253 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MMP2P08253 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
MMP2P08253 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MMP2P08253 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MMP2P08253 AC126763.1-201ENST00000552015 2118 ntBASIC18.86■□□□□ 0.61
MMP2P08253 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MMP2P08253 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.85■□□□□ 0.61
MMP2P08253 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MMP2P08253 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MMP2P08253 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MMP2P08253 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MMP2P08253 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.85■□□□□ 0.61
MMP2P08253 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.85■□□□□ 0.61
MMP2P08253 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.85■□□□□ 0.61
MMP2P08253 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MMP2P08253 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.85■□□□□ 0.61
MMP2P08253 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.85■□□□□ 0.61
MMP2P08253 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.85■□□□□ 0.61
MMP2P08253 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.85■□□□□ 0.61
MMP2P08253 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MMP2P08253 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.85■□□□□ 0.61
MMP2P08253 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
MMP2P08253 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MMP2P08253 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MMP2P08253 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
MMP2P08253 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.85■□□□□ 0.61
MMP2P08253 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MMP2P08253 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
MMP2P08253 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.85■□□□□ 0.61
MMP2P08253 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MMP2P08253 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.84■□□□□ 0.61
MMP2P08253 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MMP2P08253 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MMP2P08253 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
MMP2P08253 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MMP2P08253 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.84■□□□□ 0.61
MMP2P08253 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MMP2P08253 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MMP2P08253 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
MMP2P08253 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MMP2P08253 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MMP2P08253 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.84■□□□□ 0.61
MMP2P08253 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MMP2P08253 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MMP2P08253 SLC25A3P1-201ENST00000443844 931 ntBASIC18.84■□□□□ 0.61
MMP2P08253 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.84■□□□□ 0.61
MMP2P08253 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.84■□□□□ 0.61
MMP2P08253 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.84■□□□□ 0.61
MMP2P08253 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MMP2P08253 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MMP2P08253 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
MMP2P08253 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.84■□□□□ 0.61
MMP2P08253 AC034236.2-201ENST00000606662 1610 ntBASIC18.84■□□□□ 0.61
MMP2P08253 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MMP2P08253 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MMP2P08253 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MMP2P08253 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MMP2P08253 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MMP2P08253 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MMP2P08253 AC005082.1-201ENST00000413042 2259 ntBASIC18.84■□□□□ 0.61
MMP2P08253 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MMP2P08253 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MMP2P08253 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MMP2P08253 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.84■□□□□ 0.61
MMP2P08253 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
MMP2P08253 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
MMP2P08253 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
MMP2P08253 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MMP2P08253 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
MMP2P08253 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
MMP2P08253 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.83■□□□□ 0.61
MMP2P08253 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MMP2P08253 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MMP2P08253 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.83■□□□□ 0.6
MMP2P08253 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.83■□□□□ 0.6
MMP2P08253 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.83■□□□□ 0.6
MMP2P08253 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.83■□□□□ 0.6
MMP2P08253 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MMP2P08253 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MMP2P08253 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.83■□□□□ 0.6
MMP2P08253 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
MMP2P08253 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms