Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
MT-ND3P03897 Z99916.2-201ENST00000604037 246 ntBASIC19.12■□□□□ 0.65
MT-ND3P03897 AC124016.1-201ENST00000609552 612 ntBASIC19.12■□□□□ 0.65
MT-ND3P03897 AL023875.1-201ENST00000640777 796 ntBASIC19.12■□□□□ 0.65
MT-ND3P03897 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
MT-ND3P03897 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MT-ND3P03897 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.12■□□□□ 0.65
MT-ND3P03897 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
MT-ND3P03897 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MT-ND3P03897 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
MT-ND3P03897 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
MT-ND3P03897 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
MT-ND3P03897 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MT-ND3P03897 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.11■□□□□ 0.65
MT-ND3P03897 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
MT-ND3P03897 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
MT-ND3P03897 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MT-ND3P03897 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MT-ND3P03897 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MT-ND3P03897 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.11■□□□□ 0.65
MT-ND3P03897 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
MT-ND3P03897 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.11■□□□□ 0.65
MT-ND3P03897 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MT-ND3P03897 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
MT-ND3P03897 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.11■□□□□ 0.65
MT-ND3P03897 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MT-ND3P03897 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.11■□□□□ 0.65
MT-ND3P03897 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.11■□□□□ 0.65
MT-ND3P03897 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.11■□□□□ 0.65
MT-ND3P03897 AL121906.2-201ENST00000621597 723 ntBASIC19.11■□□□□ 0.65
MT-ND3P03897 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
MT-ND3P03897 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MT-ND3P03897 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MT-ND3P03897 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.11■□□□□ 0.65
MT-ND3P03897 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
MT-ND3P03897 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.11■□□□□ 0.65
MT-ND3P03897 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MT-ND3P03897 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.1■□□□□ 0.65
MT-ND3P03897 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.1■□□□□ 0.65
MT-ND3P03897 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
MT-ND3P03897 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.1■□□□□ 0.65
MT-ND3P03897 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
MT-ND3P03897 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
MT-ND3P03897 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
MT-ND3P03897 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MT-ND3P03897 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
MT-ND3P03897 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MT-ND3P03897 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
MT-ND3P03897 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MT-ND3P03897 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.1■□□□□ 0.65
MT-ND3P03897 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MT-ND3P03897 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MT-ND3P03897 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.1■□□□□ 0.65
MT-ND3P03897 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MT-ND3P03897 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MT-ND3P03897 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MT-ND3P03897 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.1■□□□□ 0.65
MT-ND3P03897 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.1■□□□□ 0.65
MT-ND3P03897 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.1■□□□□ 0.65
MT-ND3P03897 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MT-ND3P03897 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MT-ND3P03897 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
MT-ND3P03897 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.1■□□□□ 0.65
MT-ND3P03897 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MT-ND3P03897 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MT-ND3P03897 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.1■□□□□ 0.65
MT-ND3P03897 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MT-ND3P03897 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MT-ND3P03897 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MT-ND3P03897 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MT-ND3P03897 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MT-ND3P03897 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MT-ND3P03897 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MT-ND3P03897 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MT-ND3P03897 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.09■□□□□ 0.65
MT-ND3P03897 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.09■□□□□ 0.65
MT-ND3P03897 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MT-ND3P03897 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MT-ND3P03897 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MT-ND3P03897 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
MT-ND3P03897 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.09■□□□□ 0.65
MT-ND3P03897 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
MT-ND3P03897 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.09■□□□□ 0.65
MT-ND3P03897 PCDHB18P-201ENST00000524813 2368 ntBASIC19.09■□□□□ 0.65
MT-ND3P03897 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MT-ND3P03897 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.09■□□□□ 0.65
MT-ND3P03897 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
MT-ND3P03897 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.09■□□□□ 0.65
MT-ND3P03897 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MT-ND3P03897 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.09■□□□□ 0.65
MT-ND3P03897 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.09■□□□□ 0.65
MT-ND3P03897 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.09■□□□□ 0.65
MT-ND3P03897 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MT-ND3P03897 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.09■□□□□ 0.65
MT-ND3P03897 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
MT-ND3P03897 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
MT-ND3P03897 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MT-ND3P03897 NOC2LP2-201ENST00000407594 1944 ntBASIC19.09■□□□□ 0.65
MT-ND3P03897 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
MT-ND3P03897 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms