Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 CLN6-221ENST00000637494 765 ntTSL 5 BASIC14.49□□□□□ -0.09
TRBV12-3P01733 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV12-3P01733 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV12-3P01733 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV12-3P01733 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV12-3P01733 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV12-3P01733 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV12-3P01733 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV12-3P01733 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC14.49□□□□□ -0.09
TRBV12-3P01733 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV12-3P01733 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TRBV12-3P01733 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV12-3P01733 KRT8P45-201ENST00000414328 1447 ntBASIC14.49□□□□□ -0.09
TRBV12-3P01733 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC14.49□□□□□ -0.09
TRBV12-3P01733 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC14.49□□□□□ -0.09
TRBV12-3P01733 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TRBV12-3P01733 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TRBV12-3P01733 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV12-3P01733 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV12-3P01733 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV12-3P01733 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV12-3P01733 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TRBV12-3P01733 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TRBV12-3P01733 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV12-3P01733 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC14.48□□□□□ -0.09
TRBV12-3P01733 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV12-3P01733 MTMR9LP-203ENST00000426597 1545 ntBASIC14.48□□□□□ -0.09
TRBV12-3P01733 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TRBV12-3P01733 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV12-3P01733 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC14.48□□□□□ -0.09
TRBV12-3P01733 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV12-3P01733 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC14.48□□□□□ -0.09
TRBV12-3P01733 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC14.48□□□□□ -0.09
TRBV12-3P01733 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
TRBV12-3P01733 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC14.48□□□□□ -0.09
TRBV12-3P01733 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV12-3P01733 AC010653.2-201ENST00000623505 997 ntBASIC14.48□□□□□ -0.09
TRBV12-3P01733 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV12-3P01733 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC14.48□□□□□ -0.09
TRBV12-3P01733 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV12-3P01733 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV12-3P01733 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
TRBV12-3P01733 NFYC-AS1-201ENST00000606277 1687 ntBASIC14.48□□□□□ -0.09
TRBV12-3P01733 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC14.48□□□□□ -0.09
TRBV12-3P01733 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV12-3P01733 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV12-3P01733 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TRBV12-3P01733 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC14.47□□□□□ -0.09
TRBV12-3P01733 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TRBV12-3P01733 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
TRBV12-3P01733 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV12-3P01733 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC14.47□□□□□ -0.09
TRBV12-3P01733 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV12-3P01733 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV12-3P01733 SNAI3-AS1-205ENST00000568633 2096 ntBASIC14.47□□□□□ -0.09
TRBV12-3P01733 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TRBV12-3P01733 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TRBV12-3P01733 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC14.47□□□□□ -0.09
TRBV12-3P01733 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC14.47□□□□□ -0.09
TRBV12-3P01733 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
TRBV12-3P01733 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC14.47□□□□□ -0.09
TRBV12-3P01733 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC14.47□□□□□ -0.09
TRBV12-3P01733 SLC25A3P1-201ENST00000443844 931 ntBASIC14.47□□□□□ -0.09
TRBV12-3P01733 GXYLT1P6-201ENST00000456472 1187 ntBASIC14.47□□□□□ -0.09
TRBV12-3P01733 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC14.47□□□□□ -0.09
TRBV12-3P01733 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV12-3P01733 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC14.47□□□□□ -0.09
TRBV12-3P01733 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC14.47□□□□□ -0.09
TRBV12-3P01733 LINC01023-201ENST00000606054 436 ntBASIC14.47□□□□□ -0.09
TRBV12-3P01733 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
TRBV12-3P01733 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV12-3P01733 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV12-3P01733 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV12-3P01733 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV12-3P01733 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV12-3P01733 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TRBV12-3P01733 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TRBV12-3P01733 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC14.47□□□□□ -0.09
TRBV12-3P01733 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC14.47□□□□□ -0.09
TRBV12-3P01733 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV12-3P01733 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC14.46□□□□□ -0.09
TRBV12-3P01733 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV12-3P01733 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC14.46□□□□□ -0.09
TRBV12-3P01733 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV12-3P01733 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV12-3P01733 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC14.46□□□□□ -0.09
TRBV12-3P01733 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC14.46□□□□□ -0.09
TRBV12-3P01733 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV12-3P01733 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV12-3P01733 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
TRBV12-3P01733 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV12-3P01733 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV12-3P01733 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
TRBV12-3P01733 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV12-3P01733 ENSA-205ENST00000361532 792 ntTSL 2 BASIC14.46□□□□□ -0.09
TRBV12-3P01733 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV12-3P01733 HMGA1P5-201ENST00000412453 271 ntBASIC14.46□□□□□ -0.09
TRBV12-3P01733 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC14.46□□□□□ -0.09
TRBV12-3P01733 AC010203.1-204ENST00000548782 407 ntBASIC14.46□□□□□ -0.09
TRBV12-3P01733 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms