Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
MBD3O95983 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
MBD3O95983 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.52■■□□□ 1.03
MBD3O95983 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC21.51■■□□□ 1.03
MBD3O95983 GNE-204ENST00000539208 2190 ntTSL 2 BASIC21.51■■□□□ 1.03
MBD3O95983 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
MBD3O95983 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MBD3O95983 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MBD3O95983 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.51■■□□□ 1.03
MBD3O95983 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MBD3O95983 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC21.51■■□□□ 1.03
MBD3O95983 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
MBD3O95983 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
MBD3O95983 BX276092.2-201ENST00000417668 665 ntBASIC21.51■■□□□ 1.03
MBD3O95983 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.51■■□□□ 1.03
MBD3O95983 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
MBD3O95983 AC068587.9-201ENST00000641814 219 ntBASIC21.51■■□□□ 1.03
MBD3O95983 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.51■■□□□ 1.03
MBD3O95983 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21.51■■□□□ 1.03
MBD3O95983 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MBD3O95983 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.51■■□□□ 1.03
MBD3O95983 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
MBD3O95983 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC21.5■■□□□ 1.03
MBD3O95983 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MBD3O95983 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21.5■■□□□ 1.03
MBD3O95983 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
MBD3O95983 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC21.5■■□□□ 1.03
MBD3O95983 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
MBD3O95983 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
MBD3O95983 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.5■■□□□ 1.03
MBD3O95983 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.5■■□□□ 1.03
MBD3O95983 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.5■■□□□ 1.03
MBD3O95983 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MBD3O95983 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.5■■□□□ 1.03
MBD3O95983 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.5■■□□□ 1.03
MBD3O95983 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MBD3O95983 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.5■■□□□ 1.03
MBD3O95983 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.5■■□□□ 1.03
MBD3O95983 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC21.5■■□□□ 1.03
MBD3O95983 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
MBD3O95983 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
MBD3O95983 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
MBD3O95983 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
MBD3O95983 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MBD3O95983 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
MBD3O95983 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MBD3O95983 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
MBD3O95983 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MBD3O95983 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MBD3O95983 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MBD3O95983 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
MBD3O95983 AC112777.1-201ENST00000540175 1423 ntBASIC21.49■■□□□ 1.03
MBD3O95983 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC21.49■■□□□ 1.03
MBD3O95983 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC21.49■■□□□ 1.03
MBD3O95983 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21.49■■□□□ 1.03
MBD3O95983 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.49■■□□□ 1.03
MBD3O95983 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
MBD3O95983 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
MBD3O95983 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
MBD3O95983 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
MBD3O95983 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
MBD3O95983 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.49■■□□□ 1.03
MBD3O95983 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.49■■□□□ 1.03
MBD3O95983 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.49■■□□□ 1.03
MBD3O95983 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
MBD3O95983 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MBD3O95983 KATNBL1P6-202ENST00000562413 1466 ntBASIC21.49■■□□□ 1.03
MBD3O95983 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
MBD3O95983 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.49■■□□□ 1.03
MBD3O95983 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MBD3O95983 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MBD3O95983 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MBD3O95983 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
MBD3O95983 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
MBD3O95983 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
MBD3O95983 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
MBD3O95983 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MBD3O95983 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
MBD3O95983 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
MBD3O95983 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MBD3O95983 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.48■■□□□ 1.03
MBD3O95983 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
MBD3O95983 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
MBD3O95983 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.48■■□□□ 1.03
MBD3O95983 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MBD3O95983 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.48■■□□□ 1.03
MBD3O95983 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.48■■□□□ 1.03
MBD3O95983 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MBD3O95983 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.48■■□□□ 1.03
MBD3O95983 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.48■■□□□ 1.03
MBD3O95983 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.48■■□□□ 1.03
MBD3O95983 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
MBD3O95983 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MBD3O95983 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC21.48■■□□□ 1.03
MBD3O95983 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MBD3O95983 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
MBD3O95983 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC21.48■■□□□ 1.03
MBD3O95983 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.48■■□□□ 1.03
MBD3O95983 CEP83-AS1-201ENST00000623122 2482 ntBASIC21.48■■□□□ 1.03
MBD3O95983 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms