Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CSPG5O95196 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.12■□□□□ 0.81
CSPG5O95196 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CSPG5O95196 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CSPG5O95196 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CSPG5O95196 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CSPG5O95196 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CSPG5O95196 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CSPG5O95196 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CSPG5O95196 ZNF815P-204ENST00000434898 1737 ntBASIC20.11■□□□□ 0.81
CSPG5O95196 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CSPG5O95196 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.11■□□□□ 0.81
CSPG5O95196 TSPY22P-201ENST00000427496 604 ntBASIC20.11■□□□□ 0.81
CSPG5O95196 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.11■□□□□ 0.81
CSPG5O95196 MCCD1P1-208ENST00000445732 328 ntBASIC20.11■□□□□ 0.81
CSPG5O95196 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.11■□□□□ 0.81
CSPG5O95196 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.11■□□□□ 0.81
CSPG5O95196 AC138894.3-201ENST00000603787 634 ntBASIC20.11■□□□□ 0.81
CSPG5O95196 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CSPG5O95196 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.11■□□□□ 0.81
CSPG5O95196 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CSPG5O95196 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
CSPG5O95196 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CSPG5O95196 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CSPG5O95196 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CSPG5O95196 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.1■□□□□ 0.81
CSPG5O95196 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CSPG5O95196 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CSPG5O95196 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CSPG5O95196 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CSPG5O95196 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CSPG5O95196 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CSPG5O95196 KRT8P26-201ENST00000534154 1276 ntBASIC20.1■□□□□ 0.81
CSPG5O95196 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CSPG5O95196 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.1■□□□□ 0.81
CSPG5O95196 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CSPG5O95196 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CSPG5O95196 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CSPG5O95196 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CSPG5O95196 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CSPG5O95196 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CSPG5O95196 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.1■□□□□ 0.81
CSPG5O95196 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.1■□□□□ 0.81
CSPG5O95196 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CSPG5O95196 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CSPG5O95196 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CSPG5O95196 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CSPG5O95196 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CSPG5O95196 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CSPG5O95196 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CSPG5O95196 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.09■□□□□ 0.81
CSPG5O95196 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.09■□□□□ 0.81
CSPG5O95196 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CSPG5O95196 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CSPG5O95196 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.09■□□□□ 0.81
CSPG5O95196 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CSPG5O95196 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.09■□□□□ 0.81
CSPG5O95196 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CSPG5O95196 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.09■□□□□ 0.81
CSPG5O95196 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CSPG5O95196 CHCHD2P8-201ENST00000429873 447 ntBASIC20.09■□□□□ 0.81
CSPG5O95196 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CSPG5O95196 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.09■□□□□ 0.81
CSPG5O95196 AL136038.4-201ENST00000603606 1261 ntBASIC20.09■□□□□ 0.81
CSPG5O95196 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CSPG5O95196 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CSPG5O95196 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CSPG5O95196 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.09■□□□□ 0.81
CSPG5O95196 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CSPG5O95196 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CSPG5O95196 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CSPG5O95196 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CSPG5O95196 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CSPG5O95196 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.09■□□□□ 0.81
CSPG5O95196 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CSPG5O95196 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.09■□□□□ 0.81
CSPG5O95196 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CSPG5O95196 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
CSPG5O95196 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CSPG5O95196 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.08■□□□□ 0.81
CSPG5O95196 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.08■□□□□ 0.81
CSPG5O95196 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CSPG5O95196 AL162377.1-201ENST00000618844 1793 ntBASIC20.08■□□□□ 0.81
CSPG5O95196 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CSPG5O95196 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CSPG5O95196 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CSPG5O95196 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.08■□□□□ 0.81
CSPG5O95196 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CSPG5O95196 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
CSPG5O95196 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CSPG5O95196 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CSPG5O95196 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CSPG5O95196 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CSPG5O95196 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CSPG5O95196 FAAHP1-202ENST00000446499 1238 ntBASIC20.08■□□□□ 0.81
CSPG5O95196 KRT17P6-201ENST00000453795 1220 ntBASIC20.08■□□□□ 0.81
CSPG5O95196 TOB2P1-201ENST00000469761 992 ntBASIC20.08■□□□□ 0.81
CSPG5O95196 SEC1P-202ENST00000473944 940 ntBASIC20.08■□□□□ 0.81
CSPG5O95196 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CSPG5O95196 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms