Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CLSTN1O94985 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.76■□□□□ 0.91
CLSTN1O94985 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CLSTN1O94985 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.76■□□□□ 0.91
CLSTN1O94985 AC233702.5-201ENST00000584107 538 ntBASIC20.76■□□□□ 0.91
CLSTN1O94985 AL445675.2-201ENST00000620291 557 ntBASIC20.76■□□□□ 0.91
CLSTN1O94985 AC113410.3-201ENST00000623366 203 ntBASIC20.76■□□□□ 0.91
CLSTN1O94985 AL031985.4-201ENST00000642138 673 ntBASIC20.76■□□□□ 0.91
CLSTN1O94985 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLSTN1O94985 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.76■□□□□ 0.91
CLSTN1O94985 AC104417.2-201ENST00000562989 1793 ntBASIC20.76■□□□□ 0.91
CLSTN1O94985 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLSTN1O94985 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLSTN1O94985 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.76■□□□□ 0.91
CLSTN1O94985 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.76■□□□□ 0.91
CLSTN1O94985 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CLSTN1O94985 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.76■□□□□ 0.91
CLSTN1O94985 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLSTN1O94985 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLSTN1O94985 AL032819.2-201ENST00000624543 2162 ntBASIC20.75■□□□□ 0.91
CLSTN1O94985 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CLSTN1O94985 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CLSTN1O94985 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.75■□□□□ 0.91
CLSTN1O94985 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLSTN1O94985 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.75■□□□□ 0.91
CLSTN1O94985 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CLSTN1O94985 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.75■□□□□ 0.91
CLSTN1O94985 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CLSTN1O94985 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.75■□□□□ 0.91
CLSTN1O94985 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CLSTN1O94985 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLSTN1O94985 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.75■□□□□ 0.91
CLSTN1O94985 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.75■□□□□ 0.91
CLSTN1O94985 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.75■□□□□ 0.91
CLSTN1O94985 AL353708.3-201ENST00000610272 989 ntBASIC20.75■□□□□ 0.91
CLSTN1O94985 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLSTN1O94985 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CLSTN1O94985 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLSTN1O94985 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLSTN1O94985 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLSTN1O94985 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLSTN1O94985 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CLSTN1O94985 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLSTN1O94985 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLSTN1O94985 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLSTN1O94985 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLSTN1O94985 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLSTN1O94985 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLSTN1O94985 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLSTN1O94985 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLSTN1O94985 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.74■□□□□ 0.91
CLSTN1O94985 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLSTN1O94985 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CLSTN1O94985 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLSTN1O94985 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLSTN1O94985 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLSTN1O94985 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLSTN1O94985 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CLSTN1O94985 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLSTN1O94985 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLSTN1O94985 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLSTN1O94985 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLSTN1O94985 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLSTN1O94985 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.74■□□□□ 0.91
CLSTN1O94985 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CLSTN1O94985 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.74■□□□□ 0.91
CLSTN1O94985 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CLSTN1O94985 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLSTN1O94985 AC079598.2-202ENST00000546624 1451 ntBASIC20.74■□□□□ 0.91
CLSTN1O94985 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLSTN1O94985 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLSTN1O94985 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CLSTN1O94985 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLSTN1O94985 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLSTN1O94985 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.73■□□□□ 0.91
CLSTN1O94985 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLSTN1O94985 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLSTN1O94985 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLSTN1O94985 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLSTN1O94985 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLSTN1O94985 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLSTN1O94985 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CLSTN1O94985 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.73■□□□□ 0.91
CLSTN1O94985 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.73■□□□□ 0.91
CLSTN1O94985 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.73■□□□□ 0.91
CLSTN1O94985 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
CLSTN1O94985 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.73■□□□□ 0.91
CLSTN1O94985 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLSTN1O94985 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLSTN1O94985 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CLSTN1O94985 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.73■□□□□ 0.91
CLSTN1O94985 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLSTN1O94985 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLSTN1O94985 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CLSTN1O94985 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CLSTN1O94985 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLSTN1O94985 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLSTN1O94985 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLSTN1O94985 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.72■□□□□ 0.91
CLSTN1O94985 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms