Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.69■□□□□ 0.74
BEST1O76090 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
BEST1O76090 AL590326.2-201ENST00000625139 305 ntBASIC19.69■□□□□ 0.74
BEST1O76090 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
BEST1O76090 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
BEST1O76090 AC098818.2-201ENST00000564925 2320 ntBASIC19.69■□□□□ 0.74
BEST1O76090 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.68■□□□□ 0.74
BEST1O76090 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
BEST1O76090 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
BEST1O76090 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.68■□□□□ 0.74
BEST1O76090 Z98044.1-201ENST00000632503 1764 ntBASIC19.68■□□□□ 0.74
BEST1O76090 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.68■□□□□ 0.74
BEST1O76090 FAM8A6P-201ENST00000407496 1135 ntBASIC19.68■□□□□ 0.74
BEST1O76090 AL359075.1-203ENST00000462729 1002 ntBASIC19.68■□□□□ 0.74
BEST1O76090 SEC1P-202ENST00000473944 940 ntBASIC19.68■□□□□ 0.74
BEST1O76090 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.68■□□□□ 0.74
BEST1O76090 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
BEST1O76090 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.68■□□□□ 0.74
BEST1O76090 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.68■□□□□ 0.74
BEST1O76090 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.68■□□□□ 0.74
BEST1O76090 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
BEST1O76090 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BEST1O76090 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.68■□□□□ 0.74
BEST1O76090 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.68■□□□□ 0.74
BEST1O76090 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BEST1O76090 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BEST1O76090 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
BEST1O76090 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BEST1O76090 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BEST1O76090 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BEST1O76090 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BEST1O76090 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.67■□□□□ 0.74
BEST1O76090 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BEST1O76090 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BEST1O76090 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BEST1O76090 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
BEST1O76090 AP000523.1-201ENST00000398242 1049 ntBASIC19.67■□□□□ 0.74
BEST1O76090 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.67■□□□□ 0.74
BEST1O76090 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.67■□□□□ 0.74
BEST1O76090 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
BEST1O76090 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.67■□□□□ 0.74
BEST1O76090 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BEST1O76090 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BEST1O76090 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BEST1O76090 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
BEST1O76090 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BEST1O76090 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BEST1O76090 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BEST1O76090 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
BEST1O76090 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.66■□□□□ 0.74
BEST1O76090 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.66■□□□□ 0.74
BEST1O76090 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
BEST1O76090 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BEST1O76090 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BEST1O76090 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.66■□□□□ 0.74
BEST1O76090 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BEST1O76090 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.66■□□□□ 0.74
BEST1O76090 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.66■□□□□ 0.74
BEST1O76090 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BEST1O76090 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BEST1O76090 SPDYE15P-201ENST00000424157 909 ntBASIC19.66■□□□□ 0.74
BEST1O76090 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
BEST1O76090 KRT18P23-201ENST00000435622 1283 ntBASIC19.66■□□□□ 0.74
BEST1O76090 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.66■□□□□ 0.74
BEST1O76090 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.66■□□□□ 0.74
BEST1O76090 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
BEST1O76090 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
BEST1O76090 AC112497.1-201ENST00000624824 639 ntBASIC19.66■□□□□ 0.74
BEST1O76090 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
BEST1O76090 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
BEST1O76090 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.66■□□□□ 0.74
BEST1O76090 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
BEST1O76090 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BEST1O76090 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.66■□□□□ 0.74
BEST1O76090 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BEST1O76090 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BEST1O76090 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.66■□□□□ 0.74
BEST1O76090 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.66■□□□□ 0.74
BEST1O76090 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
BEST1O76090 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BEST1O76090 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BEST1O76090 AC087289.5-201ENST00000586076 3175 ntBASIC19.65■□□□□ 0.74
BEST1O76090 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
BEST1O76090 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BEST1O76090 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
BEST1O76090 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
BEST1O76090 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
BEST1O76090 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BEST1O76090 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
BEST1O76090 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BEST1O76090 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.65■□□□□ 0.74
BEST1O76090 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
BEST1O76090 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.65■□□□□ 0.74
BEST1O76090 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.65■□□□□ 0.74
BEST1O76090 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.65■□□□□ 0.74
BEST1O76090 MYC-208ENST00000641036 567 ntBASIC19.65■□□□□ 0.74
BEST1O76090 AL499627.1-201ENST00000569373 2188 ntBASIC19.65■□□□□ 0.74
BEST1O76090 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
BEST1O76090 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BEST1O76090 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms