Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE3O75131 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE3O75131 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
CPNE3O75131 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE3O75131 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE3O75131 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE3O75131 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.99■□□□□ 0.47
CPNE3O75131 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE3O75131 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE3O75131 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE3O75131 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CPNE3O75131 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE3O75131 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE3O75131 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE3O75131 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE3O75131 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE3O75131 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.99■□□□□ 0.47
CPNE3O75131 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE3O75131 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.99■□□□□ 0.47
CPNE3O75131 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE3O75131 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.99■□□□□ 0.47
CPNE3O75131 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.99■□□□□ 0.47
CPNE3O75131 AC009947.2-201ENST00000444014 672 ntBASIC17.99■□□□□ 0.47
CPNE3O75131 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE3O75131 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.99■□□□□ 0.47
CPNE3O75131 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.99■□□□□ 0.47
CPNE3O75131 AL441883.1-201ENST00000566170 1045 ntBASIC17.99■□□□□ 0.47
CPNE3O75131 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE3O75131 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.99■□□□□ 0.47
CPNE3O75131 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.99■□□□□ 0.47
CPNE3O75131 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.99■□□□□ 0.47
CPNE3O75131 AC008622.2-201ENST00000617006 1229 ntBASIC17.99■□□□□ 0.47
CPNE3O75131 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE3O75131 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE3O75131 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE3O75131 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE3O75131 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE3O75131 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE3O75131 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CPNE3O75131 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE3O75131 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE3O75131 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
CPNE3O75131 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CPNE3O75131 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE3O75131 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE3O75131 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.98■□□□□ 0.47
CPNE3O75131 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE3O75131 AL031133.1-201ENST00000406807 723 ntBASIC17.98■□□□□ 0.47
CPNE3O75131 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.98■□□□□ 0.47
CPNE3O75131 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.98■□□□□ 0.47
CPNE3O75131 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.98■□□□□ 0.47
CPNE3O75131 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.98■□□□□ 0.47
CPNE3O75131 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE3O75131 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE3O75131 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE3O75131 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.98■□□□□ 0.47
CPNE3O75131 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE3O75131 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE3O75131 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE3O75131 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.98■□□□□ 0.47
CPNE3O75131 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.98■□□□□ 0.47
CPNE3O75131 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE3O75131 AC004408.2-201ENST00000623613 2777 ntBASIC17.98■□□□□ 0.47
CPNE3O75131 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE3O75131 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
CPNE3O75131 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE3O75131 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE3O75131 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.98■□□□□ 0.47
CPNE3O75131 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE3O75131 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE3O75131 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE3O75131 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CPNE3O75131 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CPNE3O75131 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE3O75131 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE3O75131 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE3O75131 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE3O75131 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE3O75131 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.97■□□□□ 0.47
CPNE3O75131 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE3O75131 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE3O75131 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.97■□□□□ 0.47
CPNE3O75131 AL359075.1-203ENST00000462729 1002 ntBASIC17.97■□□□□ 0.47
CPNE3O75131 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE3O75131 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.97■□□□□ 0.47
CPNE3O75131 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.97■□□□□ 0.47
CPNE3O75131 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.97■□□□□ 0.47
CPNE3O75131 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.97■□□□□ 0.47
CPNE3O75131 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.97■□□□□ 0.47
CPNE3O75131 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CPNE3O75131 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.97■□□□□ 0.47
CPNE3O75131 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.97■□□□□ 0.47
CPNE3O75131 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
CPNE3O75131 HCG11-201ENST00000411553 5696 ntBASIC17.97■□□□□ 0.47
CPNE3O75131 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.97■□□□□ 0.47
CPNE3O75131 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE3O75131 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE3O75131 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE3O75131 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.97■□□□□ 0.47
CPNE3O75131 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms