Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CTNSO60931 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTNSO60931 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CTNSO60931 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.57■□□□□ 0.4
CTNSO60931 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.57■□□□□ 0.4
CTNSO60931 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTNSO60931 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTNSO60931 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTNSO60931 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTNSO60931 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTNSO60931 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTNSO60931 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.57■□□□□ 0.4
CTNSO60931 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.57■□□□□ 0.4
CTNSO60931 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CTNSO60931 AC010203.1-204ENST00000548782 407 ntBASIC17.57■□□□□ 0.4
CTNSO60931 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTNSO60931 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.57■□□□□ 0.4
CTNSO60931 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTNSO60931 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.57■□□□□ 0.4
CTNSO60931 AL138966.2-201ENST00000621997 464 ntBASIC17.57■□□□□ 0.4
CTNSO60931 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.57■□□□□ 0.4
CTNSO60931 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTNSO60931 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.57■□□□□ 0.4
CTNSO60931 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTNSO60931 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CTNSO60931 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTNSO60931 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTNSO60931 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTNSO60931 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTNSO60931 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTNSO60931 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTNSO60931 MTMR9LP-203ENST00000426597 1545 ntBASIC17.57■□□□□ 0.4
CTNSO60931 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CTNSO60931 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTNSO60931 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CTNSO60931 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.56■□□□□ 0.4
CTNSO60931 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.56■□□□□ 0.4
CTNSO60931 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CTNSO60931 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTNSO60931 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CTNSO60931 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.56■□□□□ 0.4
CTNSO60931 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CTNSO60931 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTNSO60931 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CTNSO60931 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTNSO60931 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTNSO60931 TERF1P1-201ENST00000311003 1181 ntBASIC17.56■□□□□ 0.4
CTNSO60931 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTNSO60931 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTNSO60931 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CTNSO60931 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.56■□□□□ 0.4
CTNSO60931 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTNSO60931 AC005521.1-201ENST00000393351 872 ntBASIC17.56■□□□□ 0.4
CTNSO60931 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CTNSO60931 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.56■□□□□ 0.4
CTNSO60931 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CTNSO60931 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.56■□□□□ 0.4
CTNSO60931 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTNSO60931 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
CTNSO60931 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTNSO60931 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTNSO60931 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTNSO60931 AC036111.1-201ENST00000533973 1582 ntBASIC17.56■□□□□ 0.4
CTNSO60931 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CTNSO60931 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
CTNSO60931 AL357033.4-201ENST00000617703 1807 ntBASIC17.56■□□□□ 0.4
CTNSO60931 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTNSO60931 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CTNSO60931 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CTNSO60931 AC073508.3-201ENST00000619697 1419 ntBASIC17.55■□□□□ 0.4
CTNSO60931 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CTNSO60931 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CTNSO60931 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTNSO60931 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTNSO60931 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTNSO60931 AC093525.10-201ENST00000625130 1569 ntBASIC17.55■□□□□ 0.4
CTNSO60931 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.55■□□□□ 0.4
CTNSO60931 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTNSO60931 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.55■□□□□ 0.4
CTNSO60931 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.55■□□□□ 0.4
CTNSO60931 AC141257.4-201ENST00000634557 245 ntBASIC17.55■□□□□ 0.4
CTNSO60931 AC136944.6-201ENST00000634818 245 ntBASIC17.55■□□□□ 0.4
CTNSO60931 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.55■□□□□ 0.4
CTNSO60931 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTNSO60931 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTNSO60931 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTNSO60931 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTNSO60931 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTNSO60931 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.55■□□□□ 0.4
CTNSO60931 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTNSO60931 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTNSO60931 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CTNSO60931 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTNSO60931 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTNSO60931 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.54■□□□□ 0.4
CTNSO60931 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.54■□□□□ 0.4
CTNSO60931 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CTNSO60931 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.54■□□□□ 0.4
CTNSO60931 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CTNSO60931 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms