Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COCHO43405 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COCHO43405 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
COCHO43405 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COCHO43405 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
COCHO43405 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
COCHO43405 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COCHO43405 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
COCHO43405 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.38■□□□□ 0.69
COCHO43405 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.38■□□□□ 0.69
COCHO43405 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COCHO43405 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.38■□□□□ 0.69
COCHO43405 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.38■□□□□ 0.69
COCHO43405 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COCHO43405 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
COCHO43405 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COCHO43405 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.38■□□□□ 0.69
COCHO43405 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
COCHO43405 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
COCHO43405 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COCHO43405 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.37■□□□□ 0.69
COCHO43405 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
COCHO43405 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COCHO43405 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COCHO43405 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.37■□□□□ 0.69
COCHO43405 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COCHO43405 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COCHO43405 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COCHO43405 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COCHO43405 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
COCHO43405 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
COCHO43405 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COCHO43405 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COCHO43405 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COCHO43405 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COCHO43405 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
COCHO43405 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.37■□□□□ 0.69
COCHO43405 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.37■□□□□ 0.69
COCHO43405 AC010240.3-201ENST00000607688 395 ntBASIC19.37■□□□□ 0.69
COCHO43405 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.37■□□□□ 0.69
COCHO43405 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
COCHO43405 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COCHO43405 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COCHO43405 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.37■□□□□ 0.69
COCHO43405 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
COCHO43405 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COCHO43405 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COCHO43405 AL357033.4-201ENST00000617703 1807 ntBASIC19.37■□□□□ 0.69
COCHO43405 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.37■□□□□ 0.69
COCHO43405 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COCHO43405 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COCHO43405 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.36■□□□□ 0.69
COCHO43405 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
COCHO43405 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
COCHO43405 MTMR9LP-203ENST00000426597 1545 ntBASIC19.36■□□□□ 0.69
COCHO43405 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
COCHO43405 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
COCHO43405 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.36■□□□□ 0.69
COCHO43405 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COCHO43405 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
COCHO43405 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.36■□□□□ 0.69
COCHO43405 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COCHO43405 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.36■□□□□ 0.69
COCHO43405 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COCHO43405 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
COCHO43405 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.36■□□□□ 0.69
COCHO43405 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
COCHO43405 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.36■□□□□ 0.69
COCHO43405 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COCHO43405 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COCHO43405 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
COCHO43405 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.36■□□□□ 0.69
COCHO43405 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
COCHO43405 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COCHO43405 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COCHO43405 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COCHO43405 Z98044.1-201ENST00000632503 1764 ntBASIC19.35■□□□□ 0.69
COCHO43405 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.35■□□□□ 0.69
COCHO43405 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COCHO43405 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.35■□□□□ 0.69
COCHO43405 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COCHO43405 AL645929.1-201ENST00000420084 975 ntBASIC19.35■□□□□ 0.69
COCHO43405 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
COCHO43405 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.35■□□□□ 0.69
COCHO43405 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.35■□□□□ 0.69
COCHO43405 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
COCHO43405 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.35■□□□□ 0.69
COCHO43405 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.35■□□□□ 0.69
COCHO43405 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COCHO43405 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.35■□□□□ 0.69
COCHO43405 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COCHO43405 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COCHO43405 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COCHO43405 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
COCHO43405 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COCHO43405 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COCHO43405 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
COCHO43405 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
COCHO43405 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
COCHO43405 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms