Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC30.35■■■□□ 2.45
CHD1O14646 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC30.35■■■□□ 2.45
CHD1O14646 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
CHD1O14646 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CHD1O14646 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CHD1O14646 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CHD1O14646 RCN1P2-201ENST00000398357 915 ntBASIC30.34■■■□□ 2.45
CHD1O14646 PON3-203ENST00000427422 894 ntTSL 3 BASIC30.34■■■□□ 2.45
CHD1O14646 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC30.34■■■□□ 2.45
CHD1O14646 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
CHD1O14646 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC30.34■■■□□ 2.45
CHD1O14646 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC30.34■■■□□ 2.45
CHD1O14646 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC30.34■■■□□ 2.45
CHD1O14646 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CHD1O14646 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
CHD1O14646 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC30.34■■■□□ 2.45
CHD1O14646 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
CHD1O14646 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CHD1O14646 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC30.33■■■□□ 2.45
CHD1O14646 DDT-206ENST00000430101 573 ntTSL 2 BASIC30.33■■■□□ 2.45
CHD1O14646 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
CHD1O14646 RPS29-206ENST00000557111 488 ntTSL 2 BASIC30.33■■■□□ 2.45
CHD1O14646 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
CHD1O14646 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC30.33■■■□□ 2.45
CHD1O14646 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CHD1O14646 AL162377.1-201ENST00000618844 1793 ntBASIC30.33■■■□□ 2.45
CHD1O14646 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC30.33■■■□□ 2.45
CHD1O14646 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
CHD1O14646 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
CHD1O14646 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
CHD1O14646 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC30.33■■■□□ 2.45
CHD1O14646 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
CHD1O14646 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CHD1O14646 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC30.33■■■□□ 2.45
CHD1O14646 ATP6V0CP3-201ENST00000417255 467 ntBASIC30.33■■■□□ 2.45
CHD1O14646 WBP2-203ENST00000433525 928 ntTSL 2 BASIC30.33■■■□□ 2.45
CHD1O14646 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC30.33■■■□□ 2.45
CHD1O14646 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC30.33■■■□□ 2.45
CHD1O14646 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC30.33■■■□□ 2.45
CHD1O14646 AC011467.4-201ENST00000594891 528 ntBASIC30.33■■■□□ 2.45
CHD1O14646 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC30.32■■■□□ 2.45
CHD1O14646 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
CHD1O14646 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC30.32■■■□□ 2.44
CHD1O14646 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
CHD1O14646 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
CHD1O14646 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CHD1O14646 WDR53-203ENST00000429115 683 ntTSL 2 BASIC30.32■■■□□ 2.44
CHD1O14646 COX20P2-201ENST00000452636 358 ntBASIC30.32■■■□□ 2.44
CHD1O14646 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC30.32■■■□□ 2.44
CHD1O14646 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC30.32■■■□□ 2.44
CHD1O14646 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC30.32■■■□□ 2.44
CHD1O14646 AP002414.3-201ENST00000589352 1468 ntBASIC30.32■■■□□ 2.44
CHD1O14646 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC30.31■■■□□ 2.44
CHD1O14646 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC30.31■■■□□ 2.44
CHD1O14646 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC30.31■■■□□ 2.44
CHD1O14646 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CHD1O14646 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CHD1O14646 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CHD1O14646 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CHD1O14646 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC30.31■■■□□ 2.44
CHD1O14646 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CHD1O14646 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CHD1O14646 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CHD1O14646 CRCP-205ENST00000431089 942 ntTSL 2 BASIC30.3■■■□□ 2.44
CHD1O14646 YBX1P5-201ENST00000509441 847 ntBASIC30.3■■■□□ 2.44
CHD1O14646 CFL1-202ENST00000524553 860 ntTSL 2 BASIC30.3■■■□□ 2.44
CHD1O14646 UNC93B6-202ENST00000528242 690 ntBASIC30.3■■■□□ 2.44
CHD1O14646 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
CHD1O14646 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CHD1O14646 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC30.3■■■□□ 2.44
CHD1O14646 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC30.3■■■□□ 2.44
CHD1O14646 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
CHD1O14646 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC30.3■■■□□ 2.44
CHD1O14646 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC30.3■■■□□ 2.44
CHD1O14646 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CHD1O14646 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
CHD1O14646 KIRREL3-AS3-201ENST00000404882 831 ntBASIC30.3■■■□□ 2.44
CHD1O14646 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC30.3■■■□□ 2.44
CHD1O14646 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC30.3■■■□□ 2.44
CHD1O14646 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC30.3■■■□□ 2.44
CHD1O14646 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC30.3■■■□□ 2.44
CHD1O14646 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC30.3■■■□□ 2.44
CHD1O14646 AC112777.1-201ENST00000540175 1423 ntBASIC30.3■■■□□ 2.44
CHD1O14646 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
CHD1O14646 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
CHD1O14646 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CHD1O14646 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
CHD1O14646 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CHD1O14646 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
CHD1O14646 AC254562.1-201ENST00000417586 456 ntBASIC30.29■■■□□ 2.44
CHD1O14646 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CHD1O14646 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC30.29■■■□□ 2.44
CHD1O14646 AC027612.4-201ENST00000605371 583 ntBASIC30.29■■■□□ 2.44
CHD1O14646 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC30.29■■■□□ 2.44
CHD1O14646 AP005117.1-201ENST00000584346 1413 ntBASIC30.29■■■□□ 2.44
CHD1O14646 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CHD1O14646 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC30.29■■■□□ 2.44
CHD1O14646 TP73-AS1-210ENST00000637775 1455 ntBASIC30.28■■■□□ 2.44
CHD1O14646 BEX3-201ENST00000361298 921 ntTSL 2 BASIC30.28■■■□□ 2.44
CHD1O14646 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms