Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
EIF3FO00303 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
EIF3FO00303 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
EIF3FO00303 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
EIF3FO00303 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
EIF3FO00303 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
EIF3FO00303 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EIF3FO00303 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EIF3FO00303 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
EIF3FO00303 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
EIF3FO00303 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
EIF3FO00303 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EIF3FO00303 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.35■□□□□ 0.53
EIF3FO00303 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
EIF3FO00303 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.35■□□□□ 0.53
EIF3FO00303 AL355075.4-201ENST00000554988 638 ntBASIC18.35■□□□□ 0.53
EIF3FO00303 AL353719.1-201ENST00000566847 864 ntBASIC18.35■□□□□ 0.53
EIF3FO00303 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.35■□□□□ 0.53
EIF3FO00303 AP000525.1-201ENST00000608286 694 ntBASIC18.35■□□□□ 0.53
EIF3FO00303 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.35■□□□□ 0.53
EIF3FO00303 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EIF3FO00303 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EIF3FO00303 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.35■□□□□ 0.53
EIF3FO00303 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
EIF3FO00303 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
EIF3FO00303 AC073592.3-201ENST00000625118 1834 ntBASIC18.35■□□□□ 0.53
EIF3FO00303 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EIF3FO00303 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
EIF3FO00303 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
EIF3FO00303 LTB4R2-202ENST00000528054 3092 ntBASIC18.34■□□□□ 0.53
EIF3FO00303 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
EIF3FO00303 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
EIF3FO00303 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EIF3FO00303 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.34■□□□□ 0.53
EIF3FO00303 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
EIF3FO00303 C2orf69P3-201ENST00000565542 1120 ntBASIC18.34■□□□□ 0.53
EIF3FO00303 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EIF3FO00303 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
EIF3FO00303 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.34■□□□□ 0.53
EIF3FO00303 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.34■□□□□ 0.53
EIF3FO00303 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
EIF3FO00303 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.34■□□□□ 0.53
EIF3FO00303 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
EIF3FO00303 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EIF3FO00303 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.34■□□□□ 0.53
EIF3FO00303 GPAT2P1-201ENST00000444924 1672 ntBASIC18.34■□□□□ 0.53
EIF3FO00303 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
EIF3FO00303 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
EIF3FO00303 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
EIF3FO00303 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EIF3FO00303 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
EIF3FO00303 WIZP1-201ENST00000531444 2299 ntBASIC18.33■□□□□ 0.53
EIF3FO00303 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
EIF3FO00303 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
EIF3FO00303 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.33■□□□□ 0.53
EIF3FO00303 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
EIF3FO00303 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
EIF3FO00303 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.33■□□□□ 0.52
EIF3FO00303 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.33■□□□□ 0.52
EIF3FO00303 MIR564-202ENST00000385049 94 ntBASIC18.33■□□□□ 0.52
EIF3FO00303 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.33■□□□□ 0.52
EIF3FO00303 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.33■□□□□ 0.52
EIF3FO00303 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.33■□□□□ 0.52
EIF3FO00303 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.33■□□□□ 0.52
EIF3FO00303 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.33■□□□□ 0.52
EIF3FO00303 AC116562.4-202ENST00000641738 218 ntBASIC18.33■□□□□ 0.52
EIF3FO00303 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
EIF3FO00303 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.33■□□□□ 0.52
EIF3FO00303 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
EIF3FO00303 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EIF3FO00303 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
EIF3FO00303 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EIF3FO00303 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EIF3FO00303 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
EIF3FO00303 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EIF3FO00303 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
EIF3FO00303 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.33■□□□□ 0.52
EIF3FO00303 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
EIF3FO00303 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
EIF3FO00303 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
EIF3FO00303 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
EIF3FO00303 AC092338.2-201ENST00000568827 1415 ntBASIC18.32■□□□□ 0.52
EIF3FO00303 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.32■□□□□ 0.52
EIF3FO00303 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.32■□□□□ 0.52
EIF3FO00303 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
EIF3FO00303 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EIF3FO00303 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EIF3FO00303 TSPY14P-201ENST00000303979 915 ntBASIC18.32■□□□□ 0.52
EIF3FO00303 AP000593.1-201ENST00000393668 712 ntBASIC18.32■□□□□ 0.52
EIF3FO00303 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.32■□□□□ 0.52
EIF3FO00303 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.32■□□□□ 0.52
EIF3FO00303 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.32■□□□□ 0.52
EIF3FO00303 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
EIF3FO00303 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.32■□□□□ 0.52
EIF3FO00303 MIR3180-5-201ENST00000583743 153 ntBASIC18.32■□□□□ 0.52
EIF3FO00303 AC010653.2-201ENST00000623505 997 ntBASIC18.32■□□□□ 0.52
EIF3FO00303 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EIF3FO00303 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
EIF3FO00303 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EIF3FO00303 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms