Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
TLR4O00206 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TLR4O00206 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.58■□□□□ 0.56
TLR4O00206 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TLR4O00206 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.58■□□□□ 0.56
TLR4O00206 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TLR4O00206 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.58■□□□□ 0.56
TLR4O00206 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
TLR4O00206 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TLR4O00206 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
TLR4O00206 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TLR4O00206 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TLR4O00206 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.57■□□□□ 0.56
TLR4O00206 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.57■□□□□ 0.56
TLR4O00206 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TLR4O00206 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TLR4O00206 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TLR4O00206 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.57■□□□□ 0.56
TLR4O00206 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TLR4O00206 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TLR4O00206 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TLR4O00206 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TLR4O00206 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TLR4O00206 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TLR4O00206 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TLR4O00206 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TLR4O00206 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TLR4O00206 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.56■□□□□ 0.56
TLR4O00206 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TLR4O00206 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TLR4O00206 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TLR4O00206 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TLR4O00206 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TLR4O00206 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TLR4O00206 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TLR4O00206 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TLR4O00206 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TLR4O00206 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TLR4O00206 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TLR4O00206 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TLR4O00206 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TLR4O00206 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TLR4O00206 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.56■□□□□ 0.56
TLR4O00206 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TLR4O00206 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.56■□□□□ 0.56
TLR4O00206 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.56■□□□□ 0.56
TLR4O00206 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.56■□□□□ 0.56
TLR4O00206 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TLR4O00206 AIRN-201ENST00000601203 4374 ntBASIC18.56■□□□□ 0.56
TLR4O00206 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TLR4O00206 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.56■□□□□ 0.56
TLR4O00206 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.56■□□□□ 0.56
TLR4O00206 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.56■□□□□ 0.56
TLR4O00206 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.56■□□□□ 0.56
TLR4O00206 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TLR4O00206 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TLR4O00206 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TLR4O00206 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
TLR4O00206 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TLR4O00206 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TLR4O00206 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TLR4O00206 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TLR4O00206 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TLR4O00206 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TLR4O00206 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TLR4O00206 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TLR4O00206 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.55■□□□□ 0.56
TLR4O00206 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TLR4O00206 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.55■□□□□ 0.56
TLR4O00206 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.55■□□□□ 0.56
TLR4O00206 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TLR4O00206 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TLR4O00206 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TLR4O00206 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.55■□□□□ 0.56
TLR4O00206 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TLR4O00206 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.55■□□□□ 0.56
TLR4O00206 AC116562.4-201ENST00000641316 2276 ntBASIC18.54■□□□□ 0.56
TLR4O00206 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TLR4O00206 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TLR4O00206 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.54■□□□□ 0.56
TLR4O00206 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TLR4O00206 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TLR4O00206 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
TLR4O00206 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TLR4O00206 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TLR4O00206 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TLR4O00206 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TLR4O00206 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.54■□□□□ 0.56
TLR4O00206 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.54■□□□□ 0.56
TLR4O00206 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.54■□□□□ 0.56
TLR4O00206 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
TLR4O00206 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.54■□□□□ 0.56
TLR4O00206 AC112497.1-201ENST00000624824 639 ntBASIC18.54■□□□□ 0.56
TLR4O00206 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.54■□□□□ 0.56
TLR4O00206 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.54■□□□□ 0.56
TLR4O00206 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.54■□□□□ 0.56
TLR4O00206 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
TLR4O00206 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TLR4O00206 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TLR4O00206 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms