Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.13■□□□□ 0.97
SPDYE4A6NLX3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SPDYE4A6NLX3 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SPDYE4A6NLX3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SPDYE4A6NLX3 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
SPDYE4A6NLX3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
SPDYE4A6NLX3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.12■□□□□ 0.97
SPDYE4A6NLX3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SPDYE4A6NLX3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SPDYE4A6NLX3 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
SPDYE4A6NLX3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SPDYE4A6NLX3 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SPDYE4A6NLX3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SPDYE4A6NLX3 IFNA1-201ENST00000276927 863 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
SPDYE4A6NLX3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SPDYE4A6NLX3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
SPDYE4A6NLX3 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SPDYE4A6NLX3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SPDYE4A6NLX3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.12■□□□□ 0.97
SPDYE4A6NLX3 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.12■□□□□ 0.97
SPDYE4A6NLX3 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SPDYE4A6NLX3 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.12■□□□□ 0.97
SPDYE4A6NLX3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.12■□□□□ 0.97
SPDYE4A6NLX3 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SPDYE4A6NLX3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.12■□□□□ 0.97
SPDYE4A6NLX3 AL136370.1-201ENST00000608166 691 ntBASIC21.12■□□□□ 0.97
SPDYE4A6NLX3 AC005363.2-201ENST00000618631 242 ntBASIC21.12■□□□□ 0.97
SPDYE4A6NLX3 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
SPDYE4A6NLX3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
SPDYE4A6NLX3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.12■□□□□ 0.97
SPDYE4A6NLX3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
SPDYE4A6NLX3 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SPDYE4A6NLX3 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SPDYE4A6NLX3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.11■□□□□ 0.97
SPDYE4A6NLX3 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SPDYE4A6NLX3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
SPDYE4A6NLX3 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SPDYE4A6NLX3 TNRC18P3-201ENST00000441896 2691 ntBASIC21.11■□□□□ 0.97
SPDYE4A6NLX3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SPDYE4A6NLX3 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SPDYE4A6NLX3 Z97985.1-201ENST00000332270 946 ntBASIC21.11■□□□□ 0.97
SPDYE4A6NLX3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SPDYE4A6NLX3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SPDYE4A6NLX3 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.11■□□□□ 0.97
SPDYE4A6NLX3 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SPDYE4A6NLX3 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC21.11■□□□□ 0.97
SPDYE4A6NLX3 AL049597.2-201ENST00000565575 961 ntBASIC21.11■□□□□ 0.97
SPDYE4A6NLX3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.11■□□□□ 0.97
SPDYE4A6NLX3 AL445228.2-201ENST00000605589 952 ntBASIC21.11■□□□□ 0.97
SPDYE4A6NLX3 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SPDYE4A6NLX3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SPDYE4A6NLX3 MIR2861-201ENST00000636310 90 ntBASIC21.11■□□□□ 0.97
SPDYE4A6NLX3 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SPDYE4A6NLX3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC21.11■□□□□ 0.97
SPDYE4A6NLX3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
SPDYE4A6NLX3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SPDYE4A6NLX3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SPDYE4A6NLX3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
SPDYE4A6NLX3 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
SPDYE4A6NLX3 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC21.1■□□□□ 0.97
SPDYE4A6NLX3 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SPDYE4A6NLX3 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SPDYE4A6NLX3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SPDYE4A6NLX3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SPDYE4A6NLX3 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.1■□□□□ 0.97
SPDYE4A6NLX3 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC21.1■□□□□ 0.97
SPDYE4A6NLX3 AC092720.2-201ENST00000602388 1665 ntBASIC21.1■□□□□ 0.97
SPDYE4A6NLX3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.1■□□□□ 0.97
SPDYE4A6NLX3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SPDYE4A6NLX3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SPDYE4A6NLX3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.1■□□□□ 0.97
SPDYE4A6NLX3 MIR1238-201ENST00000408483 83 ntBASIC21.1■□□□□ 0.97
SPDYE4A6NLX3 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.1■□□□□ 0.97
SPDYE4A6NLX3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SPDYE4A6NLX3 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SPDYE4A6NLX3 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.1■□□□□ 0.97
SPDYE4A6NLX3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.1■□□□□ 0.97
SPDYE4A6NLX3 AL031963.3-201ENST00000606441 850 ntBASIC21.1■□□□□ 0.97
SPDYE4A6NLX3 AP000525.1-201ENST00000608286 694 ntBASIC21.1■□□□□ 0.97
SPDYE4A6NLX3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SPDYE4A6NLX3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SPDYE4A6NLX3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SPDYE4A6NLX3 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SPDYE4A6NLX3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SPDYE4A6NLX3 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SPDYE4A6NLX3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SPDYE4A6NLX3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.1■□□□□ 0.97
SPDYE4A6NLX3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SPDYE4A6NLX3 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SPDYE4A6NLX3 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SPDYE4A6NLX3 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SPDYE4A6NLX3 NOC2LP2-201ENST00000407594 1944 ntBASIC21.1■□□□□ 0.97
SPDYE4A6NLX3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SPDYE4A6NLX3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC21.09■□□□□ 0.97
SPDYE4A6NLX3 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SPDYE4A6NLX3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SPDYE4A6NLX3 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SPDYE4A6NLX3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SPDYE4A6NLX3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SPDYE4A6NLX3 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms