Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM49BA6NDI0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM49BA6NDI0 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.7■□□□□ 0.9
TRIM49BA6NDI0 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
TRIM49BA6NDI0 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM49BA6NDI0 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM49BA6NDI0 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.7■□□□□ 0.9
TRIM49BA6NDI0 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
TRIM49BA6NDI0 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.7■□□□□ 0.9
TRIM49BA6NDI0 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.69■□□□□ 0.9
TRIM49BA6NDI0 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM49BA6NDI0 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM49BA6NDI0 AL357033.4-201ENST00000617703 1807 ntBASIC20.69■□□□□ 0.9
TRIM49BA6NDI0 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
TRIM49BA6NDI0 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM49BA6NDI0 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
TRIM49BA6NDI0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM49BA6NDI0 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.69■□□□□ 0.9
TRIM49BA6NDI0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM49BA6NDI0 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM49BA6NDI0 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM49BA6NDI0 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
TRIM49BA6NDI0 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM49BA6NDI0 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM49BA6NDI0 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM49BA6NDI0 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
TRIM49BA6NDI0 CD177P1-201ENST00000606252 935 ntBASIC20.69■□□□□ 0.9
TRIM49BA6NDI0 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM49BA6NDI0 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
TRIM49BA6NDI0 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
TRIM49BA6NDI0 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.69■□□□□ 0.9
TRIM49BA6NDI0 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.69■□□□□ 0.9
TRIM49BA6NDI0 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM49BA6NDI0 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM49BA6NDI0 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.69■□□□□ 0.9
TRIM49BA6NDI0 AC073592.3-201ENST00000625118 1834 ntBASIC20.69■□□□□ 0.9
TRIM49BA6NDI0 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM49BA6NDI0 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.69■□□□□ 0.9
TRIM49BA6NDI0 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.69■□□□□ 0.9
TRIM49BA6NDI0 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM49BA6NDI0 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM49BA6NDI0 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM49BA6NDI0 RCC2P3-201ENST00000418112 1537 ntBASIC20.68■□□□□ 0.9
TRIM49BA6NDI0 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.68■□□□□ 0.9
TRIM49BA6NDI0 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM49BA6NDI0 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM49BA6NDI0 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM49BA6NDI0 GCSHP5-201ENST00000443090 522 ntBASIC20.68■□□□□ 0.9
TRIM49BA6NDI0 AL158047.1-201ENST00000445918 881 ntBASIC20.68■□□□□ 0.9
TRIM49BA6NDI0 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.68■□□□□ 0.9
TRIM49BA6NDI0 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.68■□□□□ 0.9
TRIM49BA6NDI0 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.68■□□□□ 0.9
TRIM49BA6NDI0 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.68■□□□□ 0.9
TRIM49BA6NDI0 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.68■□□□□ 0.9
TRIM49BA6NDI0 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TRIM49BA6NDI0 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TRIM49BA6NDI0 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM49BA6NDI0 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.68■□□□□ 0.9
TRIM49BA6NDI0 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
TRIM49BA6NDI0 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.68■□□□□ 0.9
TRIM49BA6NDI0 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM49BA6NDI0 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.67■□□□□ 0.9
TRIM49BA6NDI0 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM49BA6NDI0 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.67■□□□□ 0.9
TRIM49BA6NDI0 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.67■□□□□ 0.9
TRIM49BA6NDI0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.67■□□□□ 0.9
TRIM49BA6NDI0 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM49BA6NDI0 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM49BA6NDI0 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.67■□□□□ 0.9
TRIM49BA6NDI0 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
TRIM49BA6NDI0 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.67■□□□□ 0.9
TRIM49BA6NDI0 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
TRIM49BA6NDI0 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.67■□□□□ 0.9
TRIM49BA6NDI0 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.67■□□□□ 0.9
TRIM49BA6NDI0 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
TRIM49BA6NDI0 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM49BA6NDI0 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.67■□□□□ 0.9
TRIM49BA6NDI0 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM49BA6NDI0 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.67■□□□□ 0.9
TRIM49BA6NDI0 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.67■□□□□ 0.9
TRIM49BA6NDI0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM49BA6NDI0 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.67■□□□□ 0.9
TRIM49BA6NDI0 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
TRIM49BA6NDI0 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.67■□□□□ 0.9
TRIM49BA6NDI0 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM49BA6NDI0 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM49BA6NDI0 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM49BA6NDI0 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM49BA6NDI0 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
TRIM49BA6NDI0 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM49BA6NDI0 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM49BA6NDI0 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM49BA6NDI0 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.66■□□□□ 0.9
TRIM49BA6NDI0 AC008622.2-201ENST00000617006 1229 ntBASIC20.66■□□□□ 0.9
TRIM49BA6NDI0 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.66■□□□□ 0.9
TRIM49BA6NDI0 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM49BA6NDI0 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM49BA6NDI0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM49BA6NDI0 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM49BA6NDI0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms