Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC13.27□□□□□ -0.28
TRBV27A0A0K0K1C4 FZD10-202ENST00000539839 3282 ntBASIC13.27□□□□□ -0.28
TRBV27A0A0K0K1C4 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV27A0A0K0K1C4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TRBV27A0A0K0K1C4 DUSP5P2-201ENST00000426873 1033 ntBASIC13.27□□□□□ -0.29
TRBV27A0A0K0K1C4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV27A0A0K0K1C4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV27A0A0K0K1C4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC13.27□□□□□ -0.29
TRBV27A0A0K0K1C4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC13.27□□□□□ -0.29
TRBV27A0A0K0K1C4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV27A0A0K0K1C4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
TRBV27A0A0K0K1C4 AC068587.9-201ENST00000641814 219 ntBASIC13.27□□□□□ -0.29
TRBV27A0A0K0K1C4 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV27A0A0K0K1C4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV27A0A0K0K1C4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV27A0A0K0K1C4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV27A0A0K0K1C4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV27A0A0K0K1C4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
TRBV27A0A0K0K1C4 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV27A0A0K0K1C4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC13.27□□□□□ -0.29
TRBV27A0A0K0K1C4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
TRBV27A0A0K0K1C4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV27A0A0K0K1C4 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV27A0A0K0K1C4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV27A0A0K0K1C4 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TRBV27A0A0K0K1C4 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV27A0A0K0K1C4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV27A0A0K0K1C4 AC138028.4-201ENST00000564984 1845 ntBASIC13.27□□□□□ -0.29
TRBV27A0A0K0K1C4 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
TRBV27A0A0K0K1C4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
TRBV27A0A0K0K1C4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV27A0A0K0K1C4 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC13.27□□□□□ -0.29
TRBV27A0A0K0K1C4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC13.27□□□□□ -0.29
TRBV27A0A0K0K1C4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC13.27□□□□□ -0.29
TRBV27A0A0K0K1C4 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV27A0A0K0K1C4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV27A0A0K0K1C4 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV27A0A0K0K1C4 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV27A0A0K0K1C4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV27A0A0K0K1C4 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV27A0A0K0K1C4 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC13.26□□□□□ -0.29
TRBV27A0A0K0K1C4 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TRBV27A0A0K0K1C4 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV27A0A0K0K1C4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC13.26□□□□□ -0.29
TRBV27A0A0K0K1C4 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV27A0A0K0K1C4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC13.26□□□□□ -0.29
TRBV27A0A0K0K1C4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV27A0A0K0K1C4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC13.26□□□□□ -0.29
TRBV27A0A0K0K1C4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC13.26□□□□□ -0.29
TRBV27A0A0K0K1C4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC13.26□□□□□ -0.29
TRBV27A0A0K0K1C4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC13.26□□□□□ -0.29
TRBV27A0A0K0K1C4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC13.26□□□□□ -0.29
TRBV27A0A0K0K1C4 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC13.26□□□□□ -0.29
TRBV27A0A0K0K1C4 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC13.26□□□□□ -0.29
TRBV27A0A0K0K1C4 AC092368.3-202ENST00000574180 1591 ntBASIC13.26□□□□□ -0.29
TRBV27A0A0K0K1C4 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC13.26□□□□□ -0.29
TRBV27A0A0K0K1C4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC13.26□□□□□ -0.29
TRBV27A0A0K0K1C4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC13.26□□□□□ -0.29
TRBV27A0A0K0K1C4 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC13.26□□□□□ -0.29
TRBV27A0A0K0K1C4 AC093677.2-201ENST00000600169 1863 ntBASIC13.26□□□□□ -0.29
TRBV27A0A0K0K1C4 AC120498.8-201ENST00000614275 531 ntBASIC13.26□□□□□ -0.29
TRBV27A0A0K0K1C4 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV27A0A0K0K1C4 HLA-B-256ENST00000639848 1089 ntBASIC13.26□□□□□ -0.29
TRBV27A0A0K0K1C4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV27A0A0K0K1C4 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV27A0A0K0K1C4 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
TRBV27A0A0K0K1C4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV27A0A0K0K1C4 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC13.26□□□□□ -0.29
TRBV27A0A0K0K1C4 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV27A0A0K0K1C4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC13.26□□□□□ -0.29
TRBV27A0A0K0K1C4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
TRBV27A0A0K0K1C4 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 PRORSD1P-202ENST00000563365 2154 ntBASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 AC004911.1-201ENST00000416316 871 ntBASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms