Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV7-1A0A0A6YYK4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV7-1A0A0A6YYK4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV7-1A0A0A6YYK4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TRBV7-1A0A0A6YYK4 SLC25A1P2-201ENST00000430693 912 ntBASIC14.58□□□□□ -0.08
TRBV7-1A0A0A6YYK4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
TRBV7-1A0A0A6YYK4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV7-1A0A0A6YYK4 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
TRBV7-1A0A0A6YYK4 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
TRBV7-1A0A0A6YYK4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC14.58□□□□□ -0.08
TRBV7-1A0A0A6YYK4 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV7-1A0A0A6YYK4 AL109659.2-201ENST00000606809 1674 ntBASIC14.58□□□□□ -0.08
TRBV7-1A0A0A6YYK4 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC14.58□□□□□ -0.08
TRBV7-1A0A0A6YYK4 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV7-1A0A0A6YYK4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV7-1A0A0A6YYK4 ANO7L1-203ENST00000602586 1720 ntBASIC14.58□□□□□ -0.08
TRBV7-1A0A0A6YYK4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV7-1A0A0A6YYK4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV7-1A0A0A6YYK4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV7-1A0A0A6YYK4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC14.57□□□□□ -0.08
TRBV7-1A0A0A6YYK4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC14.57□□□□□ -0.08
TRBV7-1A0A0A6YYK4 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV7-1A0A0A6YYK4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV7-1A0A0A6YYK4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV7-1A0A0A6YYK4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
TRBV7-1A0A0A6YYK4 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TRBV7-1A0A0A6YYK4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TRBV7-1A0A0A6YYK4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV7-1A0A0A6YYK4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV7-1A0A0A6YYK4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV7-1A0A0A6YYK4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC14.57□□□□□ -0.08
TRBV7-1A0A0A6YYK4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV7-1A0A0A6YYK4 CCR12P-201ENST00000446203 998 ntBASIC14.57□□□□□ -0.08
TRBV7-1A0A0A6YYK4 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC14.57□□□□□ -0.08
TRBV7-1A0A0A6YYK4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC14.57□□□□□ -0.08
TRBV7-1A0A0A6YYK4 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV7-1A0A0A6YYK4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV7-1A0A0A6YYK4 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC14.57□□□□□ -0.08
TRBV7-1A0A0A6YYK4 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV7-1A0A0A6YYK4 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV7-1A0A0A6YYK4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV7-1A0A0A6YYK4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC14.57□□□□□ -0.08
TRBV7-1A0A0A6YYK4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC14.57□□□□□ -0.08
TRBV7-1A0A0A6YYK4 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV7-1A0A0A6YYK4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV7-1A0A0A6YYK4 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TRBV7-1A0A0A6YYK4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 TSPY17P-201ENST00000450329 467 ntBASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 FDX2-206ENST00000492239 773 ntTSL 2 BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 DET1-205ENST00000558413 583 ntTSL 4 BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 FITM1-202ENST00000559294 800 ntBASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 C2orf69P3-201ENST00000565542 1120 ntBASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 SNX21-213ENST00000614929 587 ntTSL 5 BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC14.56□□□□□ -0.08
TRBV7-1A0A0A6YYK4 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV7-1A0A0A6YYK4 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV7-1A0A0A6YYK4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC14.55□□□□□ -0.08
TRBV7-1A0A0A6YYK4 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
TRBV7-1A0A0A6YYK4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms