Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC13.32□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC13.32□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC13.31□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 TREX2-204ENST00000370212 861 ntTSL 5 BASIC13.31□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC13.31□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC13.31□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 AC006058.3-201ENST00000606217 1069 ntBASIC13.31□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 AC116351.2-201ENST00000606540 1585 ntBASIC13.31□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC13.31□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC13.3□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 KRT18P29-201ENST00000397031 1267 ntBASIC13.3□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC13.3□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC13.3□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 AC008403.3-201ENST00000598924 454 ntBASIC13.3□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms