Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV5-3A0A0A0MS03 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV5-3A0A0A0MS03 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
TRBV5-3A0A0A0MS03 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.59■□□□□ 0.41
TRBV5-3A0A0A0MS03 HTR7P1-201ENST00000538670 1336 ntBASIC17.59■□□□□ 0.41
TRBV5-3A0A0A0MS03 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV5-3A0A0A0MS03 AL355802.2-201ENST00000402069 882 ntBASIC17.59■□□□□ 0.41
TRBV5-3A0A0A0MS03 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
TRBV5-3A0A0A0MS03 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.59■□□□□ 0.41
TRBV5-3A0A0A0MS03 KRT18P41-201ENST00000518924 1277 ntBASIC17.59■□□□□ 0.41
TRBV5-3A0A0A0MS03 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.59■□□□□ 0.41
TRBV5-3A0A0A0MS03 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.59■□□□□ 0.41
TRBV5-3A0A0A0MS03 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
TRBV5-3A0A0A0MS03 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.59■□□□□ 0.41
TRBV5-3A0A0A0MS03 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.59■□□□□ 0.41
TRBV5-3A0A0A0MS03 AL353708.3-201ENST00000610272 989 ntBASIC17.59■□□□□ 0.41
TRBV5-3A0A0A0MS03 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.59■□□□□ 0.41
TRBV5-3A0A0A0MS03 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.59■□□□□ 0.41
TRBV5-3A0A0A0MS03 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV5-3A0A0A0MS03 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV5-3A0A0A0MS03 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.59■□□□□ 0.41
TRBV5-3A0A0A0MS03 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
TRBV5-3A0A0A0MS03 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV5-3A0A0A0MS03 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TRBV5-3A0A0A0MS03 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV5-3A0A0A0MS03 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV5-3A0A0A0MS03 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.58■□□□□ 0.41
TRBV5-3A0A0A0MS03 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRBV5-3A0A0A0MS03 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRBV5-3A0A0A0MS03 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.58■□□□□ 0.41
TRBV5-3A0A0A0MS03 RCC2P3-201ENST00000418112 1537 ntBASIC17.58■□□□□ 0.41
TRBV5-3A0A0A0MS03 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRBV5-3A0A0A0MS03 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
TRBV5-3A0A0A0MS03 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRBV5-3A0A0A0MS03 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV5-3A0A0A0MS03 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV5-3A0A0A0MS03 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV5-3A0A0A0MS03 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV5-3A0A0A0MS03 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.58■□□□□ 0.4
TRBV5-3A0A0A0MS03 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV5-3A0A0A0MS03 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV5-3A0A0A0MS03 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
TRBV5-3A0A0A0MS03 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV5-3A0A0A0MS03 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.58■□□□□ 0.4
TRBV5-3A0A0A0MS03 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.58■□□□□ 0.4
TRBV5-3A0A0A0MS03 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
TRBV5-3A0A0A0MS03 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV5-3A0A0A0MS03 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.58■□□□□ 0.4
TRBV5-3A0A0A0MS03 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV5-3A0A0A0MS03 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
TRBV5-3A0A0A0MS03 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.58■□□□□ 0.4
TRBV5-3A0A0A0MS03 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
TRBV5-3A0A0A0MS03 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TRBV5-3A0A0A0MS03 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV5-3A0A0A0MS03 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV5-3A0A0A0MS03 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.58■□□□□ 0.4
TRBV5-3A0A0A0MS03 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TRBV5-3A0A0A0MS03 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.57■□□□□ 0.4
TRBV5-3A0A0A0MS03 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TRBV5-3A0A0A0MS03 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-3A0A0A0MS03 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-3A0A0A0MS03 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-3A0A0A0MS03 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-3A0A0A0MS03 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-3A0A0A0MS03 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-3A0A0A0MS03 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.57■□□□□ 0.4
TRBV5-3A0A0A0MS03 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-3A0A0A0MS03 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-3A0A0A0MS03 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-3A0A0A0MS03 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.57■□□□□ 0.4
TRBV5-3A0A0A0MS03 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
TRBV5-3A0A0A0MS03 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TRBV5-3A0A0A0MS03 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TRBV5-3A0A0A0MS03 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-3A0A0A0MS03 SLC25A6P5-201ENST00000435663 894 ntBASIC17.57■□□□□ 0.4
TRBV5-3A0A0A0MS03 RNA5SP413-201ENST00000516373 109 ntBASIC17.57■□□□□ 0.4
TRBV5-3A0A0A0MS03 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.57■□□□□ 0.4
TRBV5-3A0A0A0MS03 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.57■□□□□ 0.4
TRBV5-3A0A0A0MS03 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-3A0A0A0MS03 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-3A0A0A0MS03 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TRBV5-3A0A0A0MS03 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.57■□□□□ 0.4
TRBV5-3A0A0A0MS03 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.57■□□□□ 0.4
TRBV5-3A0A0A0MS03 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-3A0A0A0MS03 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-3A0A0A0MS03 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-3A0A0A0MS03 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-3A0A0A0MS03 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-3A0A0A0MS03 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-3A0A0A0MS03 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TRBV5-3A0A0A0MS03 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV5-3A0A0A0MS03 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV5-3A0A0A0MS03 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV5-3A0A0A0MS03 AC020916.1-201ENST00000587762 1774 ntBASIC17.56■□□□□ 0.4
TRBV5-3A0A0A0MS03 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV5-3A0A0A0MS03 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TRBV5-3A0A0A0MS03 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.56■□□□□ 0.4
TRBV5-3A0A0A0MS03 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.56■□□□□ 0.4
TRBV5-3A0A0A0MS03 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV5-3A0A0A0MS03 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms