Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.2■■□□□ 1.47
PCDHA9Q9Y5H5 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.2■■□□□ 1.47
PCDHA9Q9Y5H5 AC021231.2-201ENST00000594613 730 ntBASIC24.2■■□□□ 1.46
PCDHA9Q9Y5H5 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHA9Q9Y5H5 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHA9Q9Y5H5 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
PCDHA9Q9Y5H5 DUX4L29-201ENST00000425409 679 ntBASIC24.19■■□□□ 1.46
PCDHA9Q9Y5H5 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHA9Q9Y5H5 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.19■■□□□ 1.46
PCDHA9Q9Y5H5 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHA9Q9Y5H5 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHA9Q9Y5H5 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHA9Q9Y5H5 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.18■■□□□ 1.46
PCDHA9Q9Y5H5 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHA9Q9Y5H5 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHA9Q9Y5H5 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.18■■□□□ 1.46
PCDHA9Q9Y5H5 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.18■■□□□ 1.46
PCDHA9Q9Y5H5 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHA9Q9Y5H5 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.17■■□□□ 1.46
PCDHA9Q9Y5H5 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHA9Q9Y5H5 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.17■■□□□ 1.46
PCDHA9Q9Y5H5 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHA9Q9Y5H5 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHA9Q9Y5H5 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.17■■□□□ 1.46
PCDHA9Q9Y5H5 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHA9Q9Y5H5 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
PCDHA9Q9Y5H5 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
PCDHA9Q9Y5H5 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.15■■□□□ 1.46
PCDHA9Q9Y5H5 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.15■■□□□ 1.46
PCDHA9Q9Y5H5 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHA9Q9Y5H5 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
PCDHA9Q9Y5H5 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.14■■□□□ 1.46
PCDHA9Q9Y5H5 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.14■■□□□ 1.46
PCDHA9Q9Y5H5 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PCDHA9Q9Y5H5 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC24.14■■□□□ 1.45
PCDHA9Q9Y5H5 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
PCDHA9Q9Y5H5 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHA9Q9Y5H5 AL449106.1-201ENST00000608517 1980 ntBASIC24.12■■□□□ 1.45
PCDHA9Q9Y5H5 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHA9Q9Y5H5 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC24.12■■□□□ 1.45
PCDHA9Q9Y5H5 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC24.12■■□□□ 1.45
PCDHA9Q9Y5H5 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC24.12■■□□□ 1.45
PCDHA9Q9Y5H5 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHA9Q9Y5H5 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
PCDHA9Q9Y5H5 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHA9Q9Y5H5 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHA9Q9Y5H5 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHA9Q9Y5H5 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHA9Q9Y5H5 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.09■■□□□ 1.45
PCDHA9Q9Y5H5 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHA9Q9Y5H5 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHA9Q9Y5H5 AP002414.2-202ENST00000590929 1450 ntBASIC24.08■■□□□ 1.45
PCDHA9Q9Y5H5 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.08■■□□□ 1.45
PCDHA9Q9Y5H5 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.08■■□□□ 1.44
PCDHA9Q9Y5H5 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.44
PCDHA9Q9Y5H5 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.07■■□□□ 1.44
PCDHA9Q9Y5H5 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.07■■□□□ 1.44
PCDHA9Q9Y5H5 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
PCDHA9Q9Y5H5 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHA9Q9Y5H5 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC24.06■■□□□ 1.44
PCDHA9Q9Y5H5 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHA9Q9Y5H5 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
PCDHA9Q9Y5H5 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC24.05■■□□□ 1.44
PCDHA9Q9Y5H5 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHA9Q9Y5H5 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHA9Q9Y5H5 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHA9Q9Y5H5 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHA9Q9Y5H5 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHA9Q9Y5H5 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC24.04■■□□□ 1.44
PCDHA9Q9Y5H5 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
PCDHA9Q9Y5H5 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHA9Q9Y5H5 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.04■■□□□ 1.44
PCDHA9Q9Y5H5 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
PCDHA9Q9Y5H5 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHA9Q9Y5H5 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
PCDHA9Q9Y5H5 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHA9Q9Y5H5 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHA9Q9Y5H5 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHA9Q9Y5H5 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.02■■□□□ 1.44
PCDHA9Q9Y5H5 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHA9Q9Y5H5 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.02■■□□□ 1.44
PCDHA9Q9Y5H5 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.02■■□□□ 1.44
PCDHA9Q9Y5H5 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHA9Q9Y5H5 AC091060.1-201ENST00000623524 1766 ntBASIC24.01■■□□□ 1.43
PCDHA9Q9Y5H5 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHA9Q9Y5H5 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHA9Q9Y5H5 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHA9Q9Y5H5 MLEC-202ENST00000412616 841 ntTSL 3 BASIC24■■□□□ 1.43
PCDHA9Q9Y5H5 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24■■□□□ 1.43
PCDHA9Q9Y5H5 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC24■■□□□ 1.43
PCDHA9Q9Y5H5 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24■■□□□ 1.43
PCDHA9Q9Y5H5 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHA9Q9Y5H5 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHA9Q9Y5H5 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHA9Q9Y5H5 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHA9Q9Y5H5 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHA9Q9Y5H5 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHA9Q9Y5H5 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
PCDHA9Q9Y5H5 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.98■■□□□ 1.43
PCDHA9Q9Y5H5 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.98■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms