Protein–RNA interactions for Protein: Q9P109

GCNT4, Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT4Q9P109 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
GCNT4Q9P109 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC27.38■■□□□ 1.97
GCNT4Q9P109 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC27.38■■□□□ 1.97
GCNT4Q9P109 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC27.38■■□□□ 1.97
GCNT4Q9P109 MIR3648-2-201ENST00000581792 180 ntBASIC27.37■■□□□ 1.97
GCNT4Q9P109 MIR3648-1-201ENST00000615959 180 ntBASIC27.37■■□□□ 1.97
GCNT4Q9P109 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC27.37■■□□□ 1.97
GCNT4Q9P109 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
GCNT4Q9P109 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
GCNT4Q9P109 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
GCNT4Q9P109 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC27.36■■□□□ 1.97
GCNT4Q9P109 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC27.36■■□□□ 1.97
GCNT4Q9P109 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
GCNT4Q9P109 GDI1-215ENST00000630693 786 ntTSL 4 BASIC27.35■■□□□ 1.97
GCNT4Q9P109 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
GCNT4Q9P109 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
GCNT4Q9P109 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
GCNT4Q9P109 MIR639-201ENST00000384974 98 ntBASIC27.34■■□□□ 1.97
GCNT4Q9P109 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC27.34■■□□□ 1.97
GCNT4Q9P109 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
GCNT4Q9P109 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
GCNT4Q9P109 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
GCNT4Q9P109 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
GCNT4Q9P109 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
GCNT4Q9P109 AC016575.1-201ENST00000607026 382 ntBASIC27.33■■□□□ 1.97
GCNT4Q9P109 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
GCNT4Q9P109 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
GCNT4Q9P109 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
GCNT4Q9P109 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
GCNT4Q9P109 CR559946.2-201ENST00000623684 991 ntBASIC27.32■■□□□ 1.96
GCNT4Q9P109 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
GCNT4Q9P109 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
GCNT4Q9P109 AGPS-202ENST00000409888 815 ntTSL 4 BASIC27.31■■□□□ 1.96
GCNT4Q9P109 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
GCNT4Q9P109 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
GCNT4Q9P109 AC110285.7-201ENST00000624417 1536 ntBASIC27.31■■□□□ 1.96
GCNT4Q9P109 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
GCNT4Q9P109 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC27.3■■□□□ 1.96
GCNT4Q9P109 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC27.3■■□□□ 1.96
GCNT4Q9P109 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
GCNT4Q9P109 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
GCNT4Q9P109 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC27.29■■□□□ 1.96
GCNT4Q9P109 MIR4449-201ENST00000578365 66 ntBASIC27.29■■□□□ 1.96
GCNT4Q9P109 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
GCNT4Q9P109 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
GCNT4Q9P109 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
GCNT4Q9P109 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
GCNT4Q9P109 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC27.28■■□□□ 1.96
GCNT4Q9P109 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC27.28■■□□□ 1.96
GCNT4Q9P109 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
GCNT4Q9P109 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
GCNT4Q9P109 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
GCNT4Q9P109 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
GCNT4Q9P109 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
GCNT4Q9P109 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
GCNT4Q9P109 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
GCNT4Q9P109 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
GCNT4Q9P109 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
GCNT4Q9P109 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
GCNT4Q9P109 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
GCNT4Q9P109 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
GCNT4Q9P109 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
GCNT4Q9P109 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC27.26■■□□□ 1.95
GCNT4Q9P109 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC27.26■■□□□ 1.95
GCNT4Q9P109 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
GCNT4Q9P109 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC27.25■■□□□ 1.95
GCNT4Q9P109 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
GCNT4Q9P109 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
GCNT4Q9P109 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
GCNT4Q9P109 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC27.24■■□□□ 1.95
GCNT4Q9P109 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
GCNT4Q9P109 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
GCNT4Q9P109 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
GCNT4Q9P109 PEX7-203ENST00000541292 945 ntTSL 5 BASIC27.23■■□□□ 1.95
GCNT4Q9P109 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
GCNT4Q9P109 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
GCNT4Q9P109 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC27.22■■□□□ 1.95
GCNT4Q9P109 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
GCNT4Q9P109 DUX4L13-201ENST00000554103 1267 ntBASIC27.22■■□□□ 1.95
GCNT4Q9P109 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC27.22■■□□□ 1.95
GCNT4Q9P109 DUX4L15-201ENST00000611059 1267 ntBASIC27.22■■□□□ 1.95
GCNT4Q9P109 DUX4L23-201ENST00000615195 1269 ntBASIC27.22■■□□□ 1.95
GCNT4Q9P109 DUX4L24-201ENST00000617576 1269 ntBASIC27.22■■□□□ 1.95
GCNT4Q9P109 DUX4L22-201ENST00000618238 1269 ntBASIC27.22■■□□□ 1.95
GCNT4Q9P109 DUX4L20-201ENST00000619712 1269 ntBASIC27.22■■□□□ 1.95
GCNT4Q9P109 DUX4L21-201ENST00000622058 1269 ntBASIC27.22■■□□□ 1.95
GCNT4Q9P109 DUX4L10-201ENST00000622460 1267 ntBASIC27.22■■□□□ 1.95
GCNT4Q9P109 DUX4L25-201ENST00000624915 1269 ntBASIC27.22■■□□□ 1.95
GCNT4Q9P109 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
GCNT4Q9P109 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
GCNT4Q9P109 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
GCNT4Q9P109 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
GCNT4Q9P109 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
GCNT4Q9P109 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
GCNT4Q9P109 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC27.21■■□□□ 1.95
GCNT4Q9P109 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
GCNT4Q9P109 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
GCNT4Q9P109 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC27.2■■□□□ 1.94
GCNT4Q9P109 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
GCNT4Q9P109 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC27.19■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms