Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.51■■□□□ 1.83
HCFC1R1Q9NWW0 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
HCFC1R1Q9NWW0 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
HCFC1R1Q9NWW0 AP004833.2-201ENST00000532228 1454 ntBASIC26.5■■□□□ 1.83
HCFC1R1Q9NWW0 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
HCFC1R1Q9NWW0 AL157400.5-201ENST00000507624 621 ntBASIC26.5■■□□□ 1.83
HCFC1R1Q9NWW0 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.5■■□□□ 1.83
HCFC1R1Q9NWW0 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26.49■■□□□ 1.83
HCFC1R1Q9NWW0 AC126177.7-201ENST00000547904 679 ntBASIC26.49■■□□□ 1.83
HCFC1R1Q9NWW0 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.49■■□□□ 1.83
HCFC1R1Q9NWW0 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
HCFC1R1Q9NWW0 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.48■■□□□ 1.83
HCFC1R1Q9NWW0 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
HCFC1R1Q9NWW0 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC26.47■■□□□ 1.83
HCFC1R1Q9NWW0 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.47■■□□□ 1.83
HCFC1R1Q9NWW0 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.47■■□□□ 1.83
HCFC1R1Q9NWW0 GFER-205ENST00000569451 517 ntTSL 5 BASIC26.47■■□□□ 1.83
HCFC1R1Q9NWW0 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
HCFC1R1Q9NWW0 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
HCFC1R1Q9NWW0 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
HCFC1R1Q9NWW0 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
HCFC1R1Q9NWW0 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.46■■□□□ 1.83
HCFC1R1Q9NWW0 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC26.46■■□□□ 1.83
HCFC1R1Q9NWW0 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
HCFC1R1Q9NWW0 AC004987.1-201ENST00000428627 508 ntBASIC26.46■■□□□ 1.83
HCFC1R1Q9NWW0 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC26.46■■□□□ 1.83
HCFC1R1Q9NWW0 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.82
HCFC1R1Q9NWW0 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC26.43■■□□□ 1.82
HCFC1R1Q9NWW0 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
HCFC1R1Q9NWW0 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC26.43■■□□□ 1.82
HCFC1R1Q9NWW0 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
HCFC1R1Q9NWW0 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
HCFC1R1Q9NWW0 TSPY13P-201ENST00000338964 914 ntBASIC26.42■■□□□ 1.82
HCFC1R1Q9NWW0 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
HCFC1R1Q9NWW0 ATP5G2P3-201ENST00000429083 425 ntBASIC26.42■■□□□ 1.82
HCFC1R1Q9NWW0 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
HCFC1R1Q9NWW0 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
HCFC1R1Q9NWW0 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
HCFC1R1Q9NWW0 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.42■■□□□ 1.82
HCFC1R1Q9NWW0 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
HCFC1R1Q9NWW0 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
HCFC1R1Q9NWW0 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC26.41■■□□□ 1.82
HCFC1R1Q9NWW0 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC26.4■■□□□ 1.82
HCFC1R1Q9NWW0 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC26.4■■□□□ 1.82
HCFC1R1Q9NWW0 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
HCFC1R1Q9NWW0 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
HCFC1R1Q9NWW0 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC26.39■■□□□ 1.82
HCFC1R1Q9NWW0 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
HCFC1R1Q9NWW0 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
HCFC1R1Q9NWW0 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
HCFC1R1Q9NWW0 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
HCFC1R1Q9NWW0 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.38■■□□□ 1.81
HCFC1R1Q9NWW0 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
HCFC1R1Q9NWW0 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
HCFC1R1Q9NWW0 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
HCFC1R1Q9NWW0 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
HCFC1R1Q9NWW0 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
HCFC1R1Q9NWW0 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
HCFC1R1Q9NWW0 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.36■■□□□ 1.81
HCFC1R1Q9NWW0 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
HCFC1R1Q9NWW0 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
HCFC1R1Q9NWW0 AC007029.1-201ENST00000604183 313 ntBASIC26.36■■□□□ 1.81
HCFC1R1Q9NWW0 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC26.36■■□□□ 1.81
HCFC1R1Q9NWW0 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
HCFC1R1Q9NWW0 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.36■■□□□ 1.81
HCFC1R1Q9NWW0 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
HCFC1R1Q9NWW0 GUK1-208ENST00000366728 842 ntTSL 2 BASIC26.35■■□□□ 1.81
HCFC1R1Q9NWW0 AL359258.2-201ENST00000564063 1566 ntBASIC26.35■■□□□ 1.81
HCFC1R1Q9NWW0 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
HCFC1R1Q9NWW0 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
HCFC1R1Q9NWW0 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
HCFC1R1Q9NWW0 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
HCFC1R1Q9NWW0 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC26.34■■□□□ 1.81
HCFC1R1Q9NWW0 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC26.33■■□□□ 1.81
HCFC1R1Q9NWW0 AL139393.2-201ENST00000608721 2025 ntBASIC26.33■■□□□ 1.81
HCFC1R1Q9NWW0 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.33■■□□□ 1.81
HCFC1R1Q9NWW0 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC26.33■■□□□ 1.81
HCFC1R1Q9NWW0 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
HCFC1R1Q9NWW0 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.33■■□□□ 1.8
HCFC1R1Q9NWW0 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.32■■□□□ 1.8
HCFC1R1Q9NWW0 ABCB10P3-201ENST00000561950 2166 ntBASIC26.32■■□□□ 1.8
HCFC1R1Q9NWW0 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
HCFC1R1Q9NWW0 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
HCFC1R1Q9NWW0 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.32■■□□□ 1.8
HCFC1R1Q9NWW0 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
HCFC1R1Q9NWW0 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
HCFC1R1Q9NWW0 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.31■■□□□ 1.8
HCFC1R1Q9NWW0 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC26.31■■□□□ 1.8
HCFC1R1Q9NWW0 AC009831.1-201ENST00000580420 1582 ntBASIC26.31■■□□□ 1.8
HCFC1R1Q9NWW0 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.3■■□□□ 1.8
HCFC1R1Q9NWW0 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
HCFC1R1Q9NWW0 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
HCFC1R1Q9NWW0 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
HCFC1R1Q9NWW0 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
HCFC1R1Q9NWW0 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.29■■□□□ 1.8
HCFC1R1Q9NWW0 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
HCFC1R1Q9NWW0 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.29■■□□□ 1.8
HCFC1R1Q9NWW0 AL592293.1-201ENST00000502889 1188 ntBASIC26.29■■□□□ 1.8
HCFC1R1Q9NWW0 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.29■■□□□ 1.8
HCFC1R1Q9NWW0 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms