Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDH20Q9HBT6 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDH20Q9HBT6 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDH20Q9HBT6 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDH20Q9HBT6 AC008813.1-201ENST00000536597 885 ntBASIC21.92■■□□□ 1.1
CDH20Q9HBT6 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.92■■□□□ 1.1
CDH20Q9HBT6 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDH20Q9HBT6 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDH20Q9HBT6 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDH20Q9HBT6 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.91■■□□□ 1.1
CDH20Q9HBT6 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDH20Q9HBT6 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CDH20Q9HBT6 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDH20Q9HBT6 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDH20Q9HBT6 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDH20Q9HBT6 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDH20Q9HBT6 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
CDH20Q9HBT6 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
CDH20Q9HBT6 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CDH20Q9HBT6 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CDH20Q9HBT6 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.89■■□□□ 1.09
CDH20Q9HBT6 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
CDH20Q9HBT6 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
CDH20Q9HBT6 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.88■■□□□ 1.09
CDH20Q9HBT6 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.87■■□□□ 1.09
CDH20Q9HBT6 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDH20Q9HBT6 AC142086.6-201ENST00000621154 1765 ntBASIC21.87■■□□□ 1.09
CDH20Q9HBT6 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDH20Q9HBT6 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDH20Q9HBT6 MIR639-201ENST00000384974 98 ntBASIC21.87■■□□□ 1.09
CDH20Q9HBT6 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.87■■□□□ 1.09
CDH20Q9HBT6 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CDH20Q9HBT6 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CDH20Q9HBT6 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.86■■□□□ 1.09
CDH20Q9HBT6 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
CDH20Q9HBT6 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.86■■□□□ 1.09
CDH20Q9HBT6 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CDH20Q9HBT6 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.86■■□□□ 1.09
CDH20Q9HBT6 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CDH20Q9HBT6 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDH20Q9HBT6 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDH20Q9HBT6 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
CDH20Q9HBT6 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CDH20Q9HBT6 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.84■■□□□ 1.09
CDH20Q9HBT6 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.84■■□□□ 1.09
CDH20Q9HBT6 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDH20Q9HBT6 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.83■■□□□ 1.08
CDH20Q9HBT6 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDH20Q9HBT6 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDH20Q9HBT6 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDH20Q9HBT6 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CDH20Q9HBT6 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.82■■□□□ 1.08
CDH20Q9HBT6 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
CDH20Q9HBT6 AC018358.1-201ENST00000631079 1402 ntBASIC21.81■■□□□ 1.08
CDH20Q9HBT6 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.81■■□□□ 1.08
CDH20Q9HBT6 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.8■■□□□ 1.08
CDH20Q9HBT6 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDH20Q9HBT6 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDH20Q9HBT6 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDH20Q9HBT6 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDH20Q9HBT6 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CDH20Q9HBT6 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
CDH20Q9HBT6 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
CDH20Q9HBT6 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDH20Q9HBT6 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CDH20Q9HBT6 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDH20Q9HBT6 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.79■■□□□ 1.08
CDH20Q9HBT6 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDH20Q9HBT6 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDH20Q9HBT6 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
CDH20Q9HBT6 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDH20Q9HBT6 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH20Q9HBT6 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH20Q9HBT6 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.77■■□□□ 1.08
CDH20Q9HBT6 AC148477.6-201ENST00000623746 465 ntBASIC21.77■■□□□ 1.08
CDH20Q9HBT6 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.77■■□□□ 1.08
CDH20Q9HBT6 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH20Q9HBT6 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.76■■□□□ 1.07
CDH20Q9HBT6 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.76■■□□□ 1.07
CDH20Q9HBT6 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.76■■□□□ 1.07
CDH20Q9HBT6 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH20Q9HBT6 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH20Q9HBT6 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CDH20Q9HBT6 MIR219A2-201ENST00000608502 1504 ntBASIC21.75■■□□□ 1.07
CDH20Q9HBT6 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH20Q9HBT6 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CDH20Q9HBT6 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CDH20Q9HBT6 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH20Q9HBT6 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH20Q9HBT6 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH20Q9HBT6 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
CDH20Q9HBT6 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDH20Q9HBT6 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CDH20Q9HBT6 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CDH20Q9HBT6 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CDH20Q9HBT6 LINC01003-201ENST00000564834 1764 ntBASIC21.72■■□□□ 1.07
CDH20Q9HBT6 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH20Q9HBT6 BX255925.1-201ENST00000566954 1854 ntBASIC21.71■■□□□ 1.07
CDH20Q9HBT6 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDH20Q9HBT6 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms