Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
RC3H2Q9HBD1 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
RC3H2Q9HBD1 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RC3H2Q9HBD1 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
RC3H2Q9HBD1 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
RC3H2Q9HBD1 RARRES2P1-201ENST00000474487 481 ntBASIC27.32■■□□□ 1.96
RC3H2Q9HBD1 AC007029.1-201ENST00000604183 313 ntBASIC27.32■■□□□ 1.96
RC3H2Q9HBD1 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RC3H2Q9HBD1 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC27.31■■□□□ 1.96
RC3H2Q9HBD1 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC27.31■■□□□ 1.96
RC3H2Q9HBD1 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
RC3H2Q9HBD1 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC27.3■■□□□ 1.96
RC3H2Q9HBD1 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RC3H2Q9HBD1 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
RC3H2Q9HBD1 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC27.29■■□□□ 1.96
RC3H2Q9HBD1 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
RC3H2Q9HBD1 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC27.29■■□□□ 1.96
RC3H2Q9HBD1 AC129492.7-201ENST00000622992 756 ntBASIC27.29■■□□□ 1.96
RC3H2Q9HBD1 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
RC3H2Q9HBD1 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC27.28■■□□□ 1.96
RC3H2Q9HBD1 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RC3H2Q9HBD1 AP004833.2-201ENST00000532228 1454 ntBASIC27.27■■□□□ 1.96
RC3H2Q9HBD1 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RC3H2Q9HBD1 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RC3H2Q9HBD1 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
RC3H2Q9HBD1 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
RC3H2Q9HBD1 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC27.25■■□□□ 1.95
RC3H2Q9HBD1 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RC3H2Q9HBD1 AC009831.1-201ENST00000580420 1582 ntBASIC27.25■■□□□ 1.95
RC3H2Q9HBD1 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RC3H2Q9HBD1 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
RC3H2Q9HBD1 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
RC3H2Q9HBD1 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC27.24■■□□□ 1.95
RC3H2Q9HBD1 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RC3H2Q9HBD1 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC27.23■■□□□ 1.95
RC3H2Q9HBD1 AL592293.1-201ENST00000502889 1188 ntBASIC27.23■■□□□ 1.95
RC3H2Q9HBD1 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC27.23■■□□□ 1.95
RC3H2Q9HBD1 REST-210ENST00000638187 1334 ntTSL 5 BASIC27.22■■□□□ 1.95
RC3H2Q9HBD1 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC27.22■■□□□ 1.95
RC3H2Q9HBD1 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
RC3H2Q9HBD1 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
RC3H2Q9HBD1 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
RC3H2Q9HBD1 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
RC3H2Q9HBD1 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
RC3H2Q9HBD1 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
RC3H2Q9HBD1 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC27.21■■□□□ 1.95
RC3H2Q9HBD1 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
RC3H2Q9HBD1 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
RC3H2Q9HBD1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
RC3H2Q9HBD1 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
RC3H2Q9HBD1 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC27.2■■□□□ 1.94
RC3H2Q9HBD1 ST7-AS1-201ENST00000456775 1889 ntBASIC27.2■■□□□ 1.94
RC3H2Q9HBD1 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
RC3H2Q9HBD1 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
RC3H2Q9HBD1 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
RC3H2Q9HBD1 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
RC3H2Q9HBD1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
RC3H2Q9HBD1 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC27.19■■□□□ 1.94
RC3H2Q9HBD1 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
RC3H2Q9HBD1 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC27.18■■□□□ 1.94
RC3H2Q9HBD1 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
RC3H2Q9HBD1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC27.18■■□□□ 1.94
RC3H2Q9HBD1 AC133552.2-201ENST00000619106 1032 ntBASIC27.18■■□□□ 1.94
RC3H2Q9HBD1 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC27.18■■□□□ 1.94
RC3H2Q9HBD1 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
RC3H2Q9HBD1 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
RC3H2Q9HBD1 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
RC3H2Q9HBD1 AC100797.4-201ENST00000631653 1827 ntBASIC27.16■■□□□ 1.94
RC3H2Q9HBD1 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RC3H2Q9HBD1 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
RC3H2Q9HBD1 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
RC3H2Q9HBD1 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC27.16■■□□□ 1.94
RC3H2Q9HBD1 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC27.16■■□□□ 1.94
RC3H2Q9HBD1 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
RC3H2Q9HBD1 AC025884.2-201ENST00000553429 711 ntBASIC27.15■■□□□ 1.94
RC3H2Q9HBD1 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC27.15■■□□□ 1.94
RC3H2Q9HBD1 SMPD5-203ENST00000639008 1464 ntBASIC27.14■■□□□ 1.94
RC3H2Q9HBD1 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.93
RC3H2Q9HBD1 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
RC3H2Q9HBD1 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
RC3H2Q9HBD1 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
RC3H2Q9HBD1 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
RC3H2Q9HBD1 AC026202.3-201ENST00000600805 1127 ntBASIC27.13■■□□□ 1.93
RC3H2Q9HBD1 AL359258.2-201ENST00000564063 1566 ntBASIC27.13■■□□□ 1.93
RC3H2Q9HBD1 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
RC3H2Q9HBD1 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
RC3H2Q9HBD1 HES4-204ENST00000484667 667 ntTSL 3 BASIC27.12■■□□□ 1.93
RC3H2Q9HBD1 DUX4L18-201ENST00000553347 1267 ntBASIC27.12■■□□□ 1.93
RC3H2Q9HBD1 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC27.12■■□□□ 1.93
RC3H2Q9HBD1 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC27.12■■□□□ 1.93
RC3H2Q9HBD1 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
RC3H2Q9HBD1 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
RC3H2Q9HBD1 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC27.11■■□□□ 1.93
RC3H2Q9HBD1 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC27.11■■□□□ 1.93
RC3H2Q9HBD1 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
RC3H2Q9HBD1 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
RC3H2Q9HBD1 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
RC3H2Q9HBD1 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
RC3H2Q9HBD1 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC27.1■■□□□ 1.93
RC3H2Q9HBD1 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 9.7 ms