Protein–RNA interactions for Protein: Q9HB31

SEBOX, Homeobox protein SEBOX, humanhuman

Predicted RBP Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEBOXQ9HB31 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SEBOXQ9HB31 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SEBOXQ9HB31 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SEBOXQ9HB31 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.18■□□□□ 0.98
SEBOXQ9HB31 LINC01971-201ENST00000617888 1048 ntBASIC21.18■□□□□ 0.98
SEBOXQ9HB31 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
SEBOXQ9HB31 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.17■□□□□ 0.98
SEBOXQ9HB31 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
SEBOXQ9HB31 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SEBOXQ9HB31 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SEBOXQ9HB31 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.16■□□□□ 0.98
SEBOXQ9HB31 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SEBOXQ9HB31 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SEBOXQ9HB31 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SEBOXQ9HB31 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.15■□□□□ 0.98
SEBOXQ9HB31 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SEBOXQ9HB31 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SEBOXQ9HB31 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
SEBOXQ9HB31 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SEBOXQ9HB31 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.15■□□□□ 0.98
SEBOXQ9HB31 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.15■□□□□ 0.98
SEBOXQ9HB31 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SEBOXQ9HB31 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SEBOXQ9HB31 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.15■□□□□ 0.98
SEBOXQ9HB31 AC110285.7-201ENST00000624417 1536 ntBASIC21.14■□□□□ 0.98
SEBOXQ9HB31 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SEBOXQ9HB31 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.14■□□□□ 0.98
SEBOXQ9HB31 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.14■□□□□ 0.97
SEBOXQ9HB31 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SEBOXQ9HB31 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.14■□□□□ 0.97
SEBOXQ9HB31 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
SEBOXQ9HB31 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
SEBOXQ9HB31 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.13■□□□□ 0.97
SEBOXQ9HB31 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
SEBOXQ9HB31 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SEBOXQ9HB31 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SEBOXQ9HB31 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.12■□□□□ 0.97
SEBOXQ9HB31 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.12■□□□□ 0.97
SEBOXQ9HB31 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SEBOXQ9HB31 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SEBOXQ9HB31 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SEBOXQ9HB31 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SEBOXQ9HB31 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
SEBOXQ9HB31 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.11■□□□□ 0.97
SEBOXQ9HB31 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SEBOXQ9HB31 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SEBOXQ9HB31 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SEBOXQ9HB31 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SEBOXQ9HB31 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SEBOXQ9HB31 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SEBOXQ9HB31 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SEBOXQ9HB31 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SEBOXQ9HB31 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.09■□□□□ 0.97
SEBOXQ9HB31 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
SEBOXQ9HB31 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
SEBOXQ9HB31 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SEBOXQ9HB31 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SEBOXQ9HB31 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SEBOXQ9HB31 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.09■□□□□ 0.97
SEBOXQ9HB31 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SEBOXQ9HB31 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.09■□□□□ 0.97
SEBOXQ9HB31 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SEBOXQ9HB31 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SEBOXQ9HB31 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
SEBOXQ9HB31 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
SEBOXQ9HB31 DUX4L13-201ENST00000554103 1267 ntBASIC21.08■□□□□ 0.97
SEBOXQ9HB31 DUX4L15-201ENST00000611059 1267 ntBASIC21.08■□□□□ 0.97
SEBOXQ9HB31 DUX4L23-201ENST00000615195 1269 ntBASIC21.08■□□□□ 0.97
SEBOXQ9HB31 DUX4L24-201ENST00000617576 1269 ntBASIC21.08■□□□□ 0.97
SEBOXQ9HB31 DUX4L22-201ENST00000618238 1269 ntBASIC21.08■□□□□ 0.97
SEBOXQ9HB31 DUX4L20-201ENST00000619712 1269 ntBASIC21.08■□□□□ 0.97
SEBOXQ9HB31 DUX4L21-201ENST00000622058 1269 ntBASIC21.08■□□□□ 0.97
SEBOXQ9HB31 DUX4L10-201ENST00000622460 1267 ntBASIC21.08■□□□□ 0.97
SEBOXQ9HB31 DUX4L25-201ENST00000624915 1269 ntBASIC21.08■□□□□ 0.97
SEBOXQ9HB31 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.08■□□□□ 0.97
SEBOXQ9HB31 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SEBOXQ9HB31 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SEBOXQ9HB31 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
SEBOXQ9HB31 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SEBOXQ9HB31 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SEBOXQ9HB31 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.06■□□□□ 0.96
SEBOXQ9HB31 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SEBOXQ9HB31 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SEBOXQ9HB31 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SEBOXQ9HB31 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.05■□□□□ 0.96
SEBOXQ9HB31 ZNRF2P2-203ENST00000454624 420 ntBASIC21.05■□□□□ 0.96
SEBOXQ9HB31 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SEBOXQ9HB31 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SEBOXQ9HB31 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SEBOXQ9HB31 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SEBOXQ9HB31 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SEBOXQ9HB31 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SEBOXQ9HB31 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SEBOXQ9HB31 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SEBOXQ9HB31 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SEBOXQ9HB31 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SEBOXQ9HB31 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SEBOXQ9HB31 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SEBOXQ9HB31 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.04■□□□□ 0.96
SEBOXQ9HB31 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms