Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
SH2D4AQ9H788 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC29.53■■■□□ 2.32
SH2D4AQ9H788 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
SH2D4AQ9H788 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
SH2D4AQ9H788 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC29.52■■■□□ 2.32
SH2D4AQ9H788 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
SH2D4AQ9H788 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
SH2D4AQ9H788 AC092296.2-201ENST00000589470 999 ntBASIC29.52■■■□□ 2.32
SH2D4AQ9H788 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC29.52■■■□□ 2.32
SH2D4AQ9H788 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
SH2D4AQ9H788 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
SH2D4AQ9H788 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
SH2D4AQ9H788 AL139393.2-201ENST00000608721 2025 ntBASIC29.52■■■□□ 2.32
SH2D4AQ9H788 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
SH2D4AQ9H788 NTF6A-201ENST00000591175 560 ntBASIC29.5■■■□□ 2.31
SH2D4AQ9H788 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
SH2D4AQ9H788 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC29.49■■■□□ 2.31
SH2D4AQ9H788 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC29.48■■■□□ 2.31
SH2D4AQ9H788 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
SH2D4AQ9H788 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC29.48■■■□□ 2.31
SH2D4AQ9H788 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC29.47■■■□□ 2.31
SH2D4AQ9H788 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC29.47■■■□□ 2.31
SH2D4AQ9H788 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
SH2D4AQ9H788 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
SH2D4AQ9H788 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC29.46■■■□□ 2.31
SH2D4AQ9H788 ECEL1P2-201ENST00000461596 1295 ntBASIC29.46■■■□□ 2.31
SH2D4AQ9H788 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC29.46■■■□□ 2.31
SH2D4AQ9H788 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
SH2D4AQ9H788 MED25-210ENST00000612854 801 ntTSL 5 BASIC29.45■■■□□ 2.31
SH2D4AQ9H788 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
SH2D4AQ9H788 MED25-214ENST00000622402 642 ntTSL 5 BASIC29.45■■■□□ 2.31
SH2D4AQ9H788 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC29.45■■■□□ 2.3
SH2D4AQ9H788 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC29.45■■■□□ 2.3
SH2D4AQ9H788 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC29.44■■■□□ 2.3
SH2D4AQ9H788 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC29.44■■■□□ 2.3
SH2D4AQ9H788 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
SH2D4AQ9H788 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
SH2D4AQ9H788 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC29.43■■■□□ 2.3
SH2D4AQ9H788 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC29.43■■■□□ 2.3
SH2D4AQ9H788 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC29.43■■■□□ 2.3
SH2D4AQ9H788 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC29.42■■■□□ 2.3
SH2D4AQ9H788 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SH2D4AQ9H788 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC29.41■■■□□ 2.3
SH2D4AQ9H788 ABCB10P3-201ENST00000561950 2166 ntBASIC29.41■■■□□ 2.3
SH2D4AQ9H788 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
SH2D4AQ9H788 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC29.39■■■□□ 2.3
SH2D4AQ9H788 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
SH2D4AQ9H788 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
SH2D4AQ9H788 HYI-213ENST00000583037 1322 ntTSL 5 BASIC29.39■■■□□ 2.3
SH2D4AQ9H788 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC29.38■■■□□ 2.29
SH2D4AQ9H788 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC29.38■■■□□ 2.29
SH2D4AQ9H788 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC29.38■■■□□ 2.29
SH2D4AQ9H788 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
SH2D4AQ9H788 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC29.38■■■□□ 2.29
SH2D4AQ9H788 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
SH2D4AQ9H788 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
SH2D4AQ9H788 ABCB10P1-201ENST00000614297 2181 ntBASIC29.37■■■□□ 2.29
SH2D4AQ9H788 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC29.37■■■□□ 2.29
SH2D4AQ9H788 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC29.37■■■□□ 2.29
SH2D4AQ9H788 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC29.37■■■□□ 2.29
SH2D4AQ9H788 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
SH2D4AQ9H788 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC29.37■■■□□ 2.29
SH2D4AQ9H788 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC29.36■■■□□ 2.29
SH2D4AQ9H788 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC29.36■■■□□ 2.29
SH2D4AQ9H788 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC29.36■■■□□ 2.29
SH2D4AQ9H788 AC012354.3-201ENST00000623734 483 ntBASIC29.36■■■□□ 2.29
SH2D4AQ9H788 AP002414.2-202ENST00000590929 1450 ntBASIC29.36■■■□□ 2.29
SH2D4AQ9H788 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SH2D4AQ9H788 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SH2D4AQ9H788 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC29.35■■■□□ 2.29
SH2D4AQ9H788 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SH2D4AQ9H788 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SH2D4AQ9H788 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC29.35■■■□□ 2.29
SH2D4AQ9H788 AL157400.5-201ENST00000507624 621 ntBASIC29.35■■■□□ 2.29
SH2D4AQ9H788 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SH2D4AQ9H788 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC29.34■■■□□ 2.29
SH2D4AQ9H788 MOB2-207ENST00000614710 705 ntTSL 5 BASIC29.34■■■□□ 2.29
SH2D4AQ9H788 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
SH2D4AQ9H788 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
SH2D4AQ9H788 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC29.33■■■□□ 2.29
SH2D4AQ9H788 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC29.33■■■□□ 2.29
SH2D4AQ9H788 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC29.32■■■□□ 2.28
SH2D4AQ9H788 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
SH2D4AQ9H788 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC29.32■■■□□ 2.28
SH2D4AQ9H788 U85056.1-201ENST00000616429 682 ntBASIC29.32■■■□□ 2.28
SH2D4AQ9H788 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
SH2D4AQ9H788 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC29.31■■■□□ 2.28
SH2D4AQ9H788 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC29.31■■■□□ 2.28
SH2D4AQ9H788 AL359258.2-201ENST00000564063 1566 ntBASIC29.3■■■□□ 2.28
SH2D4AQ9H788 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
SH2D4AQ9H788 REST-210ENST00000638187 1334 ntTSL 5 BASIC29.3■■■□□ 2.28
SH2D4AQ9H788 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC29.3■■■□□ 2.28
SH2D4AQ9H788 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC29.3■■■□□ 2.28
SH2D4AQ9H788 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC29.3■■■□□ 2.28
SH2D4AQ9H788 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
SH2D4AQ9H788 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC29.29■■■□□ 2.28
SH2D4AQ9H788 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
SH2D4AQ9H788 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
SH2D4AQ9H788 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
SH2D4AQ9H788 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms