Protein–RNA interactions for Protein: Q9H089

LSG1, Large subunit GTPase 1 homolog, humanhuman

Known RBP Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1Q9H089 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
LSG1Q9H089 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
LSG1Q9H089 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC30.23■■■□□ 2.43
LSG1Q9H089 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
LSG1Q9H089 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
LSG1Q9H089 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
LSG1Q9H089 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
LSG1Q9H089 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
LSG1Q9H089 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
LSG1Q9H089 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
LSG1Q9H089 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC30.22■■■□□ 2.43
LSG1Q9H089 LINC01971-201ENST00000617888 1048 ntBASIC30.22■■■□□ 2.43
LSG1Q9H089 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
LSG1Q9H089 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
LSG1Q9H089 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC30.21■■■□□ 2.43
LSG1Q9H089 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC30.21■■■□□ 2.43
LSG1Q9H089 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC30.21■■■□□ 2.43
LSG1Q9H089 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC30.2■■■□□ 2.43
LSG1Q9H089 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC30.2■■■□□ 2.43
LSG1Q9H089 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
LSG1Q9H089 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
LSG1Q9H089 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
LSG1Q9H089 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC30.19■■■□□ 2.42
LSG1Q9H089 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
LSG1Q9H089 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC30.18■■■□□ 2.42
LSG1Q9H089 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC30.18■■■□□ 2.42
LSG1Q9H089 MLEC-202ENST00000412616 841 ntTSL 3 BASIC30.18■■■□□ 2.42
LSG1Q9H089 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC30.18■■■□□ 2.42
LSG1Q9H089 CHML-204ENST00000638121 920 ntTSL 2 BASIC30.18■■■□□ 2.42
LSG1Q9H089 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC30.18■■■□□ 2.42
LSG1Q9H089 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
LSG1Q9H089 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC30.17■■■□□ 2.42
LSG1Q9H089 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
LSG1Q9H089 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
LSG1Q9H089 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
LSG1Q9H089 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC30.17■■■□□ 2.42
LSG1Q9H089 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC30.17■■■□□ 2.42
LSG1Q9H089 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC30.16■■■□□ 2.42
LSG1Q9H089 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
LSG1Q9H089 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
LSG1Q9H089 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
LSG1Q9H089 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
LSG1Q9H089 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC30.14■■■□□ 2.42
LSG1Q9H089 ZNRF2P2-203ENST00000454624 420 ntBASIC30.14■■■□□ 2.42
LSG1Q9H089 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
LSG1Q9H089 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC30.14■■■□□ 2.41
LSG1Q9H089 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC30.14■■■□□ 2.41
LSG1Q9H089 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
LSG1Q9H089 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
LSG1Q9H089 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC30.13■■■□□ 2.41
LSG1Q9H089 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
LSG1Q9H089 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
LSG1Q9H089 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC30.12■■■□□ 2.41
LSG1Q9H089 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
LSG1Q9H089 DUX4L13-201ENST00000554103 1267 ntBASIC30.12■■■□□ 2.41
LSG1Q9H089 DUX4L15-201ENST00000611059 1267 ntBASIC30.12■■■□□ 2.41
LSG1Q9H089 DUX4L23-201ENST00000615195 1269 ntBASIC30.12■■■□□ 2.41
LSG1Q9H089 DUX4L24-201ENST00000617576 1269 ntBASIC30.12■■■□□ 2.41
LSG1Q9H089 DUX4L22-201ENST00000618238 1269 ntBASIC30.12■■■□□ 2.41
LSG1Q9H089 DUX4L20-201ENST00000619712 1269 ntBASIC30.12■■■□□ 2.41
LSG1Q9H089 DUX4L21-201ENST00000622058 1269 ntBASIC30.12■■■□□ 2.41
LSG1Q9H089 DUX4L10-201ENST00000622460 1267 ntBASIC30.12■■■□□ 2.41
LSG1Q9H089 DUX4L25-201ENST00000624915 1269 ntBASIC30.12■■■□□ 2.41
LSG1Q9H089 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC30.12■■■□□ 2.41
LSG1Q9H089 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
LSG1Q9H089 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC30.11■■■□□ 2.41
LSG1Q9H089 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
LSG1Q9H089 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC30.1■■■□□ 2.41
LSG1Q9H089 DUX4L11-201ENST00000611504 1267 ntBASIC30.1■■■□□ 2.41
LSG1Q9H089 DUX4L12-201ENST00000614593 1267 ntBASIC30.1■■■□□ 2.41
LSG1Q9H089 DUX4L14-201ENST00000621227 1267 ntBASIC30.1■■■□□ 2.41
LSG1Q9H089 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC30.1■■■□□ 2.41
LSG1Q9H089 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
LSG1Q9H089 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
LSG1Q9H089 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC30.09■■■□□ 2.41
LSG1Q9H089 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC30.09■■■□□ 2.41
LSG1Q9H089 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
LSG1Q9H089 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC30.08■■■□□ 2.41
LSG1Q9H089 RPS2-210ENST00000530225 765 ntTSL 2 BASIC30.08■■■□□ 2.41
LSG1Q9H089 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC30.07■■■□□ 2.4
LSG1Q9H089 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
LSG1Q9H089 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC30.07■■■□□ 2.4
LSG1Q9H089 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
LSG1Q9H089 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC30.06■■■□□ 2.4
LSG1Q9H089 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
LSG1Q9H089 ABHD17AP4-201ENST00000411545 909 ntBASIC30.05■■■□□ 2.4
LSG1Q9H089 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC30.05■■■□□ 2.4
LSG1Q9H089 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC30.05■■■□□ 2.4
LSG1Q9H089 PKM-203ENST00000389093 2279 ntTSL 5 BASIC30.05■■■□□ 2.4
LSG1Q9H089 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
LSG1Q9H089 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC30.03■■■□□ 2.4
LSG1Q9H089 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
LSG1Q9H089 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC30.03■■■□□ 2.4
LSG1Q9H089 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
LSG1Q9H089 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC30.02■■■□□ 2.4
LSG1Q9H089 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
LSG1Q9H089 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC30.01■■■□□ 2.4
LSG1Q9H089 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC30.01■■■□□ 2.4
LSG1Q9H089 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
LSG1Q9H089 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms