Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MUC4Q99102 BOD1-206ENST00000480951 814 ntTSL 2 BASIC18.33■□□□□ 0.52
MUC4Q99102 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
MUC4Q99102 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MUC4Q99102 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
MUC4Q99102 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
MUC4Q99102 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MUC4Q99102 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MUC4Q99102 MIR6090-201ENST00000622481 60 ntBASIC18.32■□□□□ 0.52
MUC4Q99102 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MUC4Q99102 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
MUC4Q99102 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC18.32■□□□□ 0.52
MUC4Q99102 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
MUC4Q99102 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MUC4Q99102 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC18.31■□□□□ 0.52
MUC4Q99102 MEST-211ENST00000437945 1455 ntTSL 5 BASIC18.31■□□□□ 0.52
MUC4Q99102 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MUC4Q99102 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
MUC4Q99102 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
MUC4Q99102 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC18.31■□□□□ 0.52
MUC4Q99102 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC18.3■□□□□ 0.52
MUC4Q99102 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MUC4Q99102 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MUC4Q99102 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
MUC4Q99102 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
MUC4Q99102 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
MUC4Q99102 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
MUC4Q99102 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
MUC4Q99102 EI24-212ENST00000615917 1407 ntTSL 2 BASIC18.29■□□□□ 0.52
MUC4Q99102 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
MUC4Q99102 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MUC4Q99102 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC18.29■□□□□ 0.52
MUC4Q99102 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MUC4Q99102 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
MUC4Q99102 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MUC4Q99102 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MUC4Q99102 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MUC4Q99102 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.27■□□□□ 0.52
MUC4Q99102 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MUC4Q99102 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC18.27■□□□□ 0.52
MUC4Q99102 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
MUC4Q99102 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
MUC4Q99102 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
MUC4Q99102 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MUC4Q99102 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC18.26■□□□□ 0.51
MUC4Q99102 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MUC4Q99102 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MUC4Q99102 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MUC4Q99102 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
MUC4Q99102 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
MUC4Q99102 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC18.25■□□□□ 0.51
MUC4Q99102 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MUC4Q99102 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC18.25■□□□□ 0.51
MUC4Q99102 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC18.24■□□□□ 0.51
MUC4Q99102 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC18.24■□□□□ 0.51
MUC4Q99102 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MUC4Q99102 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MUC4Q99102 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MUC4Q99102 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MUC4Q99102 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MUC4Q99102 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MUC4Q99102 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
MUC4Q99102 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MUC4Q99102 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC18.23■□□□□ 0.51
MUC4Q99102 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC18.23■□□□□ 0.51
MUC4Q99102 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MUC4Q99102 RPS2-202ENST00000526522 924 ntTSL 2 BASIC18.23■□□□□ 0.51
MUC4Q99102 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
MUC4Q99102 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MUC4Q99102 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
MUC4Q99102 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MUC4Q99102 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MUC4Q99102 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MUC4Q99102 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC18.21■□□□□ 0.51
MUC4Q99102 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC18.21■□□□□ 0.51
MUC4Q99102 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
MUC4Q99102 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MUC4Q99102 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
MUC4Q99102 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
MUC4Q99102 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC18.2■□□□□ 0.5
MUC4Q99102 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MUC4Q99102 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC18.19■□□□□ 0.5
MUC4Q99102 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MUC4Q99102 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
MUC4Q99102 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MUC4Q99102 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC18.18■□□□□ 0.5
MUC4Q99102 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC18.18■□□□□ 0.5
MUC4Q99102 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC18.18■□□□□ 0.5
MUC4Q99102 CIB2-204ENST00000557846 934 ntTSL 3 BASIC18.18■□□□□ 0.5
MUC4Q99102 MIR4449-201ENST00000578365 66 ntBASIC18.18■□□□□ 0.5
MUC4Q99102 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
MUC4Q99102 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
MUC4Q99102 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
MUC4Q99102 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MUC4Q99102 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
MUC4Q99102 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC18.17■□□□□ 0.5
MUC4Q99102 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MUC4Q99102 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
MUC4Q99102 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
MUC4Q99102 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms