Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC074183.2-201ENST00000623112 922 ntBASIC27.67■■■□□ 2.02
LRCH3Q96II8 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC27.67■■■□□ 2.02
LRCH3Q96II8 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
LRCH3Q96II8 AC110285.7-201ENST00000624417 1536 ntBASIC27.67■■■□□ 2.02
LRCH3Q96II8 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC27.66■■■□□ 2.02
LRCH3Q96II8 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC27.65■■■□□ 2.02
LRCH3Q96II8 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
LRCH3Q96II8 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC27.65■■■□□ 2.02
LRCH3Q96II8 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
LRCH3Q96II8 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
LRCH3Q96II8 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
LRCH3Q96II8 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC27.64■■■□□ 2.02
LRCH3Q96II8 MED25-210ENST00000612854 801 ntTSL 5 BASIC27.64■■■□□ 2.02
LRCH3Q96II8 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
LRCH3Q96II8 MED25-214ENST00000622402 642 ntTSL 5 BASIC27.64■■■□□ 2.02
LRCH3Q96II8 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
LRCH3Q96II8 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
LRCH3Q96II8 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC27.63■■■□□ 2.01
LRCH3Q96II8 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC27.63■■■□□ 2.01
LRCH3Q96II8 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
LRCH3Q96II8 PVT1_1.1-201ENST00000615125 194 ntBASIC27.62■■■□□ 2.01
LRCH3Q96II8 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC27.62■■■□□ 2.01
LRCH3Q96II8 WHAMMP2-203ENST00000563942 1603 ntBASIC27.62■■■□□ 2.01
LRCH3Q96II8 PEMT-206ENST00000435340 960 ntTSL 5 BASIC27.61■■■□□ 2.01
LRCH3Q96II8 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
LRCH3Q96II8 RPS2-210ENST00000530225 765 ntTSL 2 BASIC27.61■■■□□ 2.01
LRCH3Q96II8 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC27.61■■■□□ 2.01
LRCH3Q96II8 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
LRCH3Q96II8 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC27.6■■■□□ 2.01
LRCH3Q96II8 AC126177.7-201ENST00000547904 679 ntBASIC27.6■■■□□ 2.01
LRCH3Q96II8 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC27.59■■■□□ 2.01
LRCH3Q96II8 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
LRCH3Q96II8 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC27.59■■■□□ 2.01
LRCH3Q96II8 ST7-205ENST00000393446 2114 ntTSL 5 BASIC27.59■■■□□ 2.01
LRCH3Q96II8 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC27.58■■■□□ 2.01
LRCH3Q96II8 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
LRCH3Q96II8 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
LRCH3Q96II8 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
LRCH3Q96II8 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC27.58■■■□□ 2.01
LRCH3Q96II8 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC27.58■■■□□ 2.01
LRCH3Q96II8 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC27.58■■■□□ 2.01
LRCH3Q96II8 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
LRCH3Q96II8 REST-210ENST00000638187 1334 ntTSL 5 BASIC27.58■■■□□ 2.01
LRCH3Q96II8 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC27.57■■■□□ 2
LRCH3Q96II8 AC139795.1-202ENST00000500444 432 ntBASIC27.57■■■□□ 2
LRCH3Q96II8 PRTG-204ENST00000561292 833 ntTSL 3 BASIC27.57■■■□□ 2
LRCH3Q96II8 AC026202.3-201ENST00000600805 1127 ntBASIC27.57■■■□□ 2
LRCH3Q96II8 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC27.57■■■□□ 2
LRCH3Q96II8 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC27.56■■■□□ 2
LRCH3Q96II8 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC27.55■■■□□ 2
LRCH3Q96II8 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC27.55■■■□□ 2
LRCH3Q96II8 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC27.55■■■□□ 2
LRCH3Q96II8 SPCS2P3-201ENST00000500401 656 ntBASIC27.55■■■□□ 2
LRCH3Q96II8 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC27.55■■■□□ 2
LRCH3Q96II8 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC27.55■■■□□ 2
LRCH3Q96II8 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC27.55■■■□□ 2
LRCH3Q96II8 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC27.54■■■□□ 2
LRCH3Q96II8 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC27.54■■■□□ 2
LRCH3Q96II8 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC27.54■■■□□ 2
LRCH3Q96II8 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC27.54■■■□□ 2
LRCH3Q96II8 AC135983.2-203ENST00000454486 1613 ntBASIC27.53■■■□□ 2
LRCH3Q96II8 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC27.53■■■□□ 2
LRCH3Q96II8 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC27.53■■■□□ 2
LRCH3Q96II8 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC27.52■■■□□ 2
LRCH3Q96II8 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC27.52■■■□□ 2
LRCH3Q96II8 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC27.52■■■□□ 2
LRCH3Q96II8 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC27.52■■■□□ 2
LRCH3Q96II8 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC27.52■■■□□ 2
LRCH3Q96II8 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC27.52■■■□□ 2
LRCH3Q96II8 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
LRCH3Q96II8 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■■□□ 2
LRCH3Q96II8 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC27.51■■□□□ 1.99
LRCH3Q96II8 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC27.51■■□□□ 1.99
LRCH3Q96II8 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
LRCH3Q96II8 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC27.51■■□□□ 1.99
LRCH3Q96II8 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
LRCH3Q96II8 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC27.5■■□□□ 1.99
LRCH3Q96II8 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC27.5■■□□□ 1.99
LRCH3Q96II8 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC27.5■■□□□ 1.99
LRCH3Q96II8 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC27.5■■□□□ 1.99
LRCH3Q96II8 MIR6765-201ENST00000614092 87 ntBASIC27.5■■□□□ 1.99
LRCH3Q96II8 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
LRCH3Q96II8 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC27.49■■□□□ 1.99
LRCH3Q96II8 AC092666.2-201ENST00000613287 246 ntBASIC27.49■■□□□ 1.99
LRCH3Q96II8 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC27.49■■□□□ 1.99
LRCH3Q96II8 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
LRCH3Q96II8 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
LRCH3Q96II8 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
LRCH3Q96II8 MIR4508-201ENST00000584178 70 ntBASIC27.48■■□□□ 1.99
LRCH3Q96II8 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
LRCH3Q96II8 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
LRCH3Q96II8 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC27.47■■□□□ 1.99
LRCH3Q96II8 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC27.47■■□□□ 1.99
LRCH3Q96II8 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
LRCH3Q96II8 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
LRCH3Q96II8 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
LRCH3Q96II8 ST7-202ENST00000323984 2142 ntTSL 5 BASIC27.47■■□□□ 1.99
LRCH3Q96II8 ST7-207ENST00000393449 2127 ntTSL 5 BASIC27.47■■□□□ 1.99
LRCH3Q96II8 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
LRCH3Q96II8 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms